Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00966 ATGGCAGCAACATTGATGGCAGCAACAAGTGGTTCGGGCACTGTTCTTAAACCAAGTCCTTTCCTAGGACAAGGCAAGGCTGGAAATGGCAACCCTCTTAGGGATGTTGTCTCAATGGGAAGTGGGAAATACAGCATGGTGATCCATGGGCGTTGGGCCATGCTCGGAGCCCTGGGCTGCATCACCCCAGAGGTGCTAGAGAAGTGGTTGAGAGTGGACTTCAAGGAGCCAGTGTGGTTCAAAGCCGGGGCCCAGATATTCTCAGAAGGTGGGCTTGACTATTTGGGCAACCCAAACCTTGTCCATGCCCAAAGCATCTTGGCAGTGCTGGGCTTCCAAGTTGTACTGATGGGCCTTGTTGAAGGGTTCCGCATCAATGGGCTAGATGGAGTAGGAGAGGGCAACAACCTCTACCCAGGAGGCCAGTACTTTGACCCACTGGGCCTTGCTGATGACCCAACCACTTTTGCTGAGCTCAAAGTGAAGGAGATCAAGAATGGAAGGCTGGCCATGTTCTCCATGTTTGGGTTCTTTGTTCAAGCCATTGTAACTGGTAAAGGCCCATTAGAGAACCTTTTGGACCATCTTGACAACCCAGTGGCTAACAATGCTTGGGTCTATGCTACCAAGTTTGCCCCTGGATCTTAA 648 0.5139 MAATLMAATSGSGTVLKPSPFLGQGKAGNGNPLRDVVSMGSGKYSMVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00966 215 Pfam Chlorophyll A-B binding protein 43 181 IPR022796 -
Vian11g00966 215 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 47 214 IPR001344 GO:0009765|GO:0016020
Vian11g00966 215 SUPERFAMILY Chlorophyll a-b binding protein 43 212 - -
Vian11g00966 215 Gene3D Chlorophyll a/b binding protein domain 34 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00966 Vian-Chr11 12171089 12172278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00966 47 214 Chloroplast and Mitochondria Gene Families AT2G05070 74.556 5.14e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00966 K08914 - gmx:100779387 369.777