Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00951 ATGGAAAGCTTAAAGGCAATGGTTTTGTGGTCTCTTGTGTTGCATTTCATACCAGGTTTGAGCACCCTTGAAACCATTGGTCCTGGCCAATCAGTGAAGGATAATGAGACTCTAGTTTCAGCAGATTGGACTTTTGAAGCAGGGTTCTTCAACTTTGGGGATCAAAGTAGTCAATACTTTGGTATATGGTACAAGGATATTTCTCCAAGAACAGTTGTGTGGATAGCCAATAGAGATACTCCAGTTCAAAACTCCTCAGGAGTTTTGAATGTAACTCATGTGGGAAATCTTTTCATTTTGAATGGTTCAGGGGCCATATTCTGGTCTTCCAATACATCAACAGCTGCAAAGAATCCTGTTGTGCAGCTTTTGGAGACTGGAAATCTTGTTGTGAGAGAAGAAAGCAACCCAGAGAATCTTCTATGGCAGAGTTTTGATCTTCCTGGGGACACTTTGTTGCCAGGGATGCGACTTCGAAGTAGCATGGGAAATGGCAGTTTTACATCTCTGACATCTTGGAGAGACACAGAAGATCCTGGTAGAGGTGTGTATTCATATCACATAGATGCTCGTGGTTTTCCTCAAGTGGTGATTATGAAGGGAGGGGCATTGTTGTATAGGCCAGGTTCATGGAATGGCAATATTTTATCTGGAATTCCTTCTGCAACATTGTACAAAAACTTTAATTTCTCTTTTGTTATAACTGAGAAGGAAGTCTCTTATGGATATGAACTACTGAACAAGTCAATTGTTTCGAGGTACATGATCACGTTAACAGGTCAAATACAACGTTTTGTTTTGTCTGATTTGACAAATAGTTGGCAGCTTTTCTACTCAGGCCCCGCAGACCAGTGTGATAATTATGCCGTTTGTGGGGTGAATTCTAATTGTGATGTAAATAGCTCTCAAACGTGTGAGTGCCTTCAGGGTTTCATTCCCAGATCCGAAGAAAAATGGAATGCACAAAACTGGTCAGATGGGTGTGTTAGGAGAGTTAATTTAGATTGTGGCAACAGTGATGGCTTTCAGAAGTATCAGGGAACGAAGTTGCCGGACACATCAACCTCATGGTTTGACAGAAGCATGAACCTTGAGGAATGTAAGAATTTCTGTCTGGAAAACTGCTCCTGCACAGCATATGCAAATTTAGATATCAGAAATGGTGGAAGTGGATGCTTGCTTTGGTTTAATAACATTGTGGACGTGAGAAAACTAACCACCGGAGGACAAGATCTTTTCATAAGAGTGTCAGCTTCAGATCTAGGTCATGAAAAAGGCTTACGCAAGAAGCAGCTTGCAGGAGTTCTTGCAGGTTCTGCAGTGTTTATTGTGGTCATGATATTATTGGCAGTGGCCATACTTCGGAGAAAAAGGCTTGAGAAGTCAGGAAACAACAAAAGTGTTAGCTGGAAAAATCACTCTGTTAAGACACAGAAGGAAGACATTGACATTCCAATATTTAAGTTTTCAACCATAGCTAAAGCAACTAATGACTTTTGCGTTACTAACATATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTACTTTGGCAAATGGCCAAGATATAGCTGTGAAGCGGCTTTGCAATAATTCAGGACAAGGACCGAAAGAGTTCATAAACGAAGTTGTGCTAATTGCTAATCTTCAGCACCGAAACCTTGTGAAGCTTCTTGGGTGTTGCATTCAAGACGATGAGAGGATCTTGATATATGAATTCATGACTAACAAAAGCTTGAACTACTTTATTTTTGATGAAGCTAGAAAAGGTTTGCTAGATTGGGCTCAGCGCTTCCAAATTATTCGTGGGATTGCCAGAGGGCTTCTCTATCTTCATGAAGATTCTAGATTAAGAATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTAGATGAAAACATGAATCCAAAAATATCAGACTTTGGTCTCGCTACATCATTTGGAGGAGATGAAGTTGAAGGCCAAACAAAGAGAATAGTGGGAACTTATGGTTATATTTCTCCAGAATATGCAGCCCGTGGGAATTTCTCAGTGAAATCTGATGTCTACAGTTTTGGTGTTATATTACTGGAGATAGTTTGTGGAAAAAAGAATAGGGAATATTCTGACGATCATGACCTTCTTGGACATGCATGGAGACTTTGGTGTGAAGAAAAACCAATGGAGTTGATAGATGAATCACTAGGCGAATCAGTAGCTCTAGCCGAAGCTGATGTATTGAGATGTATTCACATTGGGCTTCTATGTGTACAAGACAGAGCAGAGGATAGACCAGAAATGTCATTAATAGTTCTTATGCTGAATGGTGAGAAACCATTGCCCAGGCCAAGGGAACCTGCTTTTTATCCCCATCAATCTGGCTCTTCATCAGGAAATAGTAAACTGCAATCAAACAATGAGATTTCTATTTCATTGTTGGAGGCAAGATAG 2436 0.4039 MESLKAMVLWSLVLHFIPGLSTLETIGPGQSVKDNETLVSADWTFEAGFFNFGDQSSQYFGIWYKDISPRTVVWIANRDTPVQNSSGVLNVTHVGNLFILNGSGAIFWSSNTSTAAKNPVVQLLETGNLVVREESNPENLLWQSFDLPGDTLLPGMRLRSSMGNGSFTSLTSWRDTEDPGRGVYSYHIDARGFPQVVIMKGGALLYRPGSWNGNILSGIPSATLYKNFNFSFVITEKEVSYGYELLNKSIVSRYMITLTGQIQRFVLSDLTNSWQLFYSGPADQCDNYAVCGVNSNCDVNSSQTCECLQGFIPRSEEKWNAQNWSDGCVRRVNLDCGNSDGFQKYQGTKLPDTSTSWFDRSMNLEECKNFCLENCSCTAYANLDIRNGGSGCLLWFNNIVDVRKLTTGGQDLFIRVSASDLGHEKGLRKKQLAGVLAGSAVFIVVMILLAVAILRRKRLEKSGNNKSVSWKNHSVKTQKEDIDIPIFKFSTIAKATNDFCVTNILGEGGFGPVYKGTLANGQDIAVKRLCNNSGQGPKEFINEVVLIANLQHRNLVKLLGCCIQDDERILIYEFMTNKSLNYFIFDEARKGLLDWAQRFQIIRGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLATSFGGDEVEGQTKRIVGTYGYISPEYAARGNFSVKSDVYSFGVILLEIVCGKKNREYSDDHDLLGHAWRLWCEEKPMELIDESLGESVALAEADVLRCIHIGLLCVQDRAEDRPEMSLIVLMLNGEKPLPRPREPAFYPHQSGSSSGNSKLQSNNEISISLLEAR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00951 811 SMART serkin_6 499 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00951 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Vian11g00951 811 ProSiteProfiles Protein kinase domain profile. 499 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00951 811 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Vian11g00951 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Vian11g00951 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 212 IPR036426 -
Vian11g00951 811 CDD PAN_AP_plant 332 417 - -
Vian11g00951 811 SMART ntp_6 337 416 IPR003609 -
Vian11g00951 811 CDD STKc_IRAK 505 771 - -
Vian11g00951 811 Pfam PAN-like domain 336 402 IPR003609 -
Vian11g00951 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 776 - -
Vian11g00951 811 CDD B_lectin 30 148 IPR001480 -
Vian11g00951 811 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Vian11g00951 811 Pfam S-locus glycoprotein domain 206 314 IPR000858 GO:0048544
Vian11g00951 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 574 - -
Vian11g00951 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Vian11g00951 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 759 - -
Vian11g00951 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 416 - -
Vian11g00951 811 Gene3D - 21 145 IPR036426 -
Vian11g00951 811 SMART blect_4 29 148 IPR001480 -
Vian11g00951 811 Gene3D Phosphorylase Kinase; domain 1 471 574 - -
Vian11g00951 811 MobiDBLite consensus disorder prediction 778 798 - -
Vian11g00951 811 Gene3D Transferase(Phosphotransferase) domain 1 575 775 - -
Vian11g00951 811 SUPERFAMILY Protein kinase-like (PK-like) 484 792 IPR011009 -
Vian11g00951 811 Gene3D Hepatocyte Growth Factor 333 414 - -
Vian11g00951 811 Pfam Protein kinase domain 502 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00951 811 Pfam D-mannose binding lectin 71 174 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00951 Vian-Chr11 11683353 11686787 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00951 425 786 Receptor kinase-like Gene Family AT4G23190 50.949 3.40e-124 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vian11g00951 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00951 - - ccaj:109805721 1341.25