Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00925 ATGGACTCACAACAGCTTTTCAGTTTTGGTGTTGCAAGTGCAGGATTACCTTACGTGCCATCTTTTCCCACTGTTCCATCCCTACCCAACAGGCTGCTTGGATCCTTGAAATATGACATTGGCAACTCACCTAATTCACCATTTTCCACTTATTTTGATTCTGACACCCTTTCTGCATTGAGTGACGGCCAAGAGCAATACAGCCCCGGAGAAATCCTCTCGGGTGTCAGCTCCTCTTGTAACTCTTCACTGGACACCAACCAATATATGTATAAATCAATCTCTTCTGTAGACTTCATAGACAATTTCCCACTATATTCTGCTTGGAACTCTCTTCCACAGAATGTGAATAGTAATCAGAAAATCCAACACGCTTTGCTAGAGCTAGAAACTGCTCTGATGGCCCCCGATGATGATCAAGTTACCACTCCAAATACATTGGCCGGGAGCAGCAGACCAATGGCATCTGGCCACAGATACAAGCCCTGGAGGCATGAGAACGATGGATCACAATATGCTCAGCCATCATATGTTCCCAGCAGTAGGCTATCAAGTGAAGTTGTGCATGTAGAGAAACGCCAAAAGTTGACGGAGGAACCATCACTACAAGCTTTCCCACAAAACGATCTGAAGCAACTGCTGATTGCATGTGCCAAAGCCCTTCATGAAAACAACATCAAAGATTTTGATCAATTGGTAGGAAAGGCTAGAGATGCTGTGTCGATCAACGGGGAGCCAATCCAGCGGCTTGGCGCTTACATGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCATCAGGGAAGAGCATCTATCATGCCCTTAGGTGCAGAGAGCCTGAAGGTGAAGAATTACTCTCTTACATGCAACTGCTGTTTGAGATTTGCCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCGGAAGCCTGCAGAAACGAGGATCGCATACACATCATAGACTTCCAAATTGCTCAAGGATCTCAGTGGATGACACTTCTTCAAGCCCTTGCAGCAAGACCTGGTGGTGCTCCACATGTTCGGATAACGGGGATTGATGATCCTGTTTCTAGATATGCACGTGGCGGCGACGGATTAGATATTGTTGGTAAAAGGTTGGGCTTGATGTCTGAGAAATTTGGCATCCCAGTTGAGTTTCATGGAGTGCCTGTTTTTAGTGAAGAAGTGACAAGGGAAATGCTAGATATCAGGCCTGGAGAGGCCTTGGCAGTGAACTTCCCCTTGCAGCTCCATCACACAGCTGATGAGAGTGTTCATGTGAGTAACCCAAGGGATGGACTATTGAGATTGGTGAAGTCACTTTCTCCCAAGGTGACCACACTGGTGGAGCAGGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTATCGAAACCTTGGATTACTACTTGGCAATCTTCGAGTCTATTGATGCCAGCCTACTCCCAAGAGAAAGCAAGGAGCGGATCAATGTGGAGCAACATTGTCTGGCCAGGGATATAGTGAATATTATTGCTTGTGAAGGCAAGGAAAGGGTTGAGAGACATGAACTATTGGGGAAGTGGAAATCCAGGTTAACAATGGCTGGATTCACTCAGTCTCCTTTGAGCTCTTATGTGAATTCTGTCATAGGAATCCTTCTCAAGTGCTATTCAGAACATTATACTCTGTTGGAGAAGGATGGAGCCATGCTGTTGGGGTGGAAGGATAGAAATTTGATATCAGCTTCTGCCTGGCATTGCTGA 1752 0.4589 MDSQQLFSFGVASAGLPYVPSFPTVPSLPNRLLGSLKYDIGNSPNSPFSTYFDSDTLSALSDGQEQYSPGEILSGVSSSCNSSLDTNQYMYKSISSVDFIDNFPLYSAWNSLPQNVNSNQKIQHALLELETALMAPDDDQVTTPNTLAGSSRPMASGHRYKPWRHENDGSQYAQPSYVPSSRLSSEVVHVEKRQKLTEEPSLQAFPQNDLKQLLIACAKALHENNIKDFDQLVGKARDAVSINGEPIQRLGAYMVEGLVARKEASGKSIYHALRCREPEGEELLSYMQLLFEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGSQWMTLLQALAARPGGAPHVRITGIDDPVSRYARGGDGLDIVGKRLGLMSEKFGIPVEFHGVPVFSEEVTREMLDIRPGEALAVNFPLQLHHTADESVHVSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDASLLPRESKERINVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFTQSPLSSYVNSVIGILLKCYSEHYTLLEKDGAMLLGWKDRNLISASAWHC 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00925 583 MobiDBLite consensus disorder prediction 138 152 - -
Vian11g00925 583 MobiDBLite consensus disorder prediction 138 157 - -
Vian11g00925 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 172 578 IPR005202 -
Vian11g00925 583 Pfam GRAS domain family 210 581 IPR005202 -
Vian11g00925 583 ProSiteProfiles GRAS family profile. 201 582 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00925 Vian-Chr11 10750208 10751959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00925 201 581 GRAS Transcription Factor Family AT1G50600 62.205 5.58e-171 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian11g00925 GRAS 5.3e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00925 - - gmx:100799073 967.222