Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00919 ATGAAGCACTTTGAAATGGGTATCATAAAGGTTATCTTTTGCAGCATTTTGGTTTTTCATATTTTGGTCGTAGTGAGCAGTGAAGAGAAAAAAACTGAAGAAGAATTCATCAGACAATTATTTGATCCTTCATCTGGACTGTTAACTGAGGATACGGCAAAGGTATTATGGATCATATGTTGGGAAGATTTGATTCGATTAAAGAAAGAAGTCTTATGCCTCTCAAAGGAATCTTGCAGAAACAGCAATCGAGTTAATTTAGAAATTGGCTCAGTAGCCAGACAAAACATTCAACAGATGATCAATGCATGTTATCCTCAATTAAAGGAAAATGTTCTTAAGTGTTTTAGAAAAAACCATTTTCCAATTGATGCTCTGAAGGAAGAGGATGCCTCTAAGATCTGGCATTCAACATACATGCCGGCGTCACCTTCATCTAGAAGATATCTGGGTCAAATTTTTCCAAAGCAACTATCAGAAACAGCGAACAAGCAACATGAATTACATATAAGCATTAAAGTTAAAGAAGATACAAAAGCATCTGGAACTAGCATGGCAATACCTCTAGTGGTAGCAGTTGTAGCTGTGGTATTTGTCATTTTATGTTGTTATAGATGTTGTGGGAGTGGACAAGTCAGCCAAAATGATGAGAGACCCCTTCTAAGCATGAGCATGAATGACTACTCAGTTGGTTCTTCTTCGAACAGTAATATTCAATTCAAAAGCTCAATGAAAGAAGGAGAAATTGGTATTCAGTCGTCGAGTATTCGATCAGTTGATGAGAAGAGAAACTCTGTGTCGTTGAATGAAAGTGAATCAGGAGAAGTTGGTAGTTGTTCTGTGAGAGCATCATTTGAACTAAAACCTCATCCTGGGAGAGCAGTAGCACCACCCCCTCCTCCTGGAAAAGGCCCTAGAGCTCCACCACCACCTCCATCTAGAGCCAAGCCTGGTCCTCCTGGTGCTGGTCCTAGACCTCCTCCACCGCCAGGTGGTGGTGCAGGTCATGCAAGAGCTCCTTCCAATCCAAAGGTTGTTGAGGAAGCCGATTACGAAGGTGAAGGGTATGTTCCTAAAACAAAGTTAAAGCCTTTCTTCTGGGATAAGGTTCAAGCTAACGATCAAGCAATGGTATGGAATCAACTCAAAGCAGGATCGTTCCAGTTTAATGAAGAAATGATCGAGACACTCTTTGGCTTTAATTCTGCGAGTACGGAAAAAGGAAAGGGCCAACCAAAAAAAGAGGCTTCCCCAACTCCCCAACTTATACAAATCGTTAACGCAAAGAAAGCACAGAATTTGTCTATTCTATTAAAAGCATTGAATGTCACCGCAGATGAAGTTTGTGATGCACTTCTTGAAGGAAATGAGCTTCCCACAGAATTCCTTCAAACCTTGTTGAAGATGGCACCCACGCAGGACGAAGAACTTAAGCTTAGAGTTTTCAGTGGTAATCTAGCCCAACTCACCCCTGCAGATAGGTTCCTTAAAGCCATAGTTGACATTCCTTGTTCTTTTAAACGAATGGAAGCATTAATTTACATGGGTACTCTTCAAGAGGATCTCACCAGTACACGAGATTCCTTTGCAATTTTAGAGGTTGCTTGTAAAAAGCTGAGAAGTAGTCGATTATTCCTGAAACTTCTTGAAGCTGTTCTGAAAACTGGGAATCGTATGAACGATGGGACATTTCGTGGTGGTGCACAAGCATTCAAACTTGATACACTGTTGAAACTATCTGATGTGAAAGGAGTAGATGGGAAGACCACACTCTTGCACTTCGTTGTTCAAGAGATAGTACGCACTGAGGGCATAAGAGCAGCACGCATGGCAAAAGAGAATCACAGTTTCTCCAGCGTAAAAACAGATGACCTTCTTGAGGACGTCTCGATTGAATCAGATGACCACTATCGTGAACTTGGTCTTCAAGTGGTTTCATATTTAAGCACTGAACTTGAAAGCGTGAAGAAAGCAGCAGCTTTAGATGCTGATGGGTTGGTAGGAACAACTTCAAGAGTAGGGCATGGTCTGATAAAAACAAGAGACTTTGTAAACAAAGAGTTGAGCAATACGAAGGGTGATAAAGGGTTTTGTGAGACAGTGAAGAGCTTCGTAGAGAAAGCTGAGGCTGATGTCAAAAGTTTGCTAGAAGAGGAGAAGAAAATCATGGGTCTGGTGAAGAGCACTGGTGATTACTTTCATGGGGATACAGGGAAGGATGAAGGGTTGAGATTATTTAACATAGTACGCGATTTCTTAGTAATGTTGGATAAGGTGTGCAAGGAGATACAACTTGCACCACCAAAGAAGCCAGCACCAAAAAGTGCAAAGCAAGAAACACCTAATCATTCTAGAAAACCTTCTTCCTCTGATAATCTTCCTCCTGCTCATGATTTAATTCGTCAAAGAATTTCTCCAGTAATTGCAAATAGGAGGACAGATGATTTTAGTTCAGATGATGACAGTCCTTAA 2472 0.409 MKHFEMGIIKVIFCSILVFHILVVVSSEEKKTEEEFIRQLFDPSSGLLTEDTAKVLWIICWEDLIRLKKEVLCLSKESCRNSNRVNLEIGSVARQNIQQMINACYPQLKENVLKCFRKNHFPIDALKEEDASKIWHSTYMPASPSSRRYLGQIFPKQLSETANKQHELHISIKVKEDTKASGTSMAIPLVVAVVAVVFVILCCYRCCGSGQVSQNDERPLLSMSMNDYSVGSSSNSNIQFKSSMKEGEIGIQSSSIRSVDEKRNSVSLNESESGEVGSCSVRASFELKPHPGRAVAPPPPPGKGPRAPPPPPSRAKPGPPGAGPRPPPPPGGGAGHARAPSNPKVVEEADYEGEGYVPKTKLKPFFWDKVQANDQAMVWNQLKAGSFQFNEEMIETLFGFNSASTEKGKGQPKKEASPTPQLIQIVNAKKAQNLSILLKALNVTADEVCDALLEGNELPTEFLQTLLKMAPTQDEELKLRVFSGNLAQLTPADRFLKAIVDIPCSFKRMEALIYMGTLQEDLTSTRDSFAILEVACKKLRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIVRTEGIRAARMAKENHSFSSVKTDDLLEDVSIESDDHYRELGLQVVSYLSTELESVKKAAALDADGLVGTTSRVGHGLIKTRDFVNKELSNTKGDKGFCETVKSFVEKAEADVKSLLEEEKKIMGLVKSTGDYFHGDTGKDEGLRLFNIVRDFLVMLDKVCKEIQLAPPKKPAPKSAKQETPNHSRKPSSSDNLPPAHDLIRQRISPVIANRRTDDFSSDDDSP 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00919 823 Gene3D Formin, FH2 domain 357 791 IPR042201 -
Vian11g00919 823 MobiDBLite consensus disorder prediction 292 334 - -
Vian11g00919 823 ProSiteProfiles Formin homology-2 (FH2) domain profile. 352 782 IPR015425 -
Vian11g00919 823 SMART it6_source 352 775 IPR015425 -
Vian11g00919 823 ProSitePatterns Serine proteases, subtilase family, serine active site. 182 192 IPR023828 -
Vian11g00919 823 MobiDBLite consensus disorder prediction 245 262 - -
Vian11g00919 823 SUPERFAMILY Formin homology 2 domain (FH2 domain) 365 764 - -
Vian11g00919 823 PANTHER FORMIN-RELATED 122 803 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vian11g00919 823 MobiDBLite consensus disorder prediction 767 823 - -
Vian11g00919 823 Pfam Formin Homology 2 Domain 356 756 IPR015425 -
Vian11g00919 823 MobiDBLite consensus disorder prediction 245 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00919 Vian-Chr11 10634136 10637390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00919 323 814 FH2 protein (formin) Gene Family AT5G54650 59.880 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00919 - - vun:114183601 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00919 11 10634136 10637390 Vian11g00919 11 10634136 10637390 ECH
Vian11g00919 11 10634136 10637390 Vian5g00589 5 21168591 21174282 PCT