Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00896 ATGGCTACCATCATTTTAAGGTCAAATGAAGTGCTTCATGCCTTGCTCTTGTTCTGTCTCTTCCTGATGCTGCACAACTGTCGTGCCTATGAATTCATTGTCGGAGGCCAAAAGGGTTGGAGTCTGCCAAGTGATCCCAATTCTAACCCTTATAGTCAATGGGCACAAAAGAGCAGATTTCAAATAGGAGACTCCTTAGTGTTCAATTACCCTTCTGGCAAAGATTCAGTGATTCAAGTAAGCAGCAAAGACTATGAGAGTTGCAACACTGATGCATACGCTGAAAAATTCTCAGACGGCCACACAGTCATCAAGCTCAGCCAATCAGGGCCTCACTACTTCATCAGTGGAAACAAAAACAACTGTCTCAAAAATGAGAAACTGGTGGTGATTGTGTTGGCCGACAGGAACAACAAAAACACATACACCAACCAAACAAGTCCTTCACCTTCTCCTTCTCAGTTTACAACACAATCAGTAGCTCCATCCCCAGCACCTTCTCAGCAACAAGTTCCATCTCCGGTGGCAGCACCTCCTCAGCAAGAGGCTGCTTCTCCACCATCTCCACCCTCTAACCAAACACCAGCTCCAGCTCCAGCTCCTGTTTCTGATCAGCCTTCTCCTCCTTCTCCTCCTCACAATGATGCTTCCTCAATCCTGGTCAGTTTTGCTGGTTCTGTTGGAGCATTATTCATGGCCTCGGTTCTGTTTTTTTCTTTGTAA 723 0.4592 MATIILRSNEVLHALLLFCLFLMLHNCRAYEFIVGGQKGWSLPSDPNSNPYSQWAQKSRFQIGDSLVFNYPSGKDSVIQVSSKDYESCNTDAYAEKFSDGHTVIKLSQSGPHYFISGNKNNCLKNEKLVVIVLADRNNKNTYTNQTSPSPSPSQFTTQSVAPSPAPSQQQVPSPVAAPPQQEAASPPSPPSNQTPAPAPAPVSDQPSPPSPPHNDASSILVSFAGSVGALFMASVLFFSL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00896 240 MobiDBLite consensus disorder prediction 140 218 - -
Vian11g00896 240 CDD OsENODL1_like 30 133 IPR041846 -
Vian11g00896 240 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Vian11g00896 240 PANTHER BLUE COPPER PROTEIN 30 161 IPR039391 GO:0009055
Vian11g00896 240 MobiDBLite consensus disorder prediction 140 166 - -
Vian11g00896 240 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Vian11g00896 240 MobiDBLite consensus disorder prediction 167 213 - -
Vian11g00896 240 FunFam Early nodulin-like protein 9 30 144 - -
Vian11g00896 240 Gene3D - 30 146 IPR008972 -
Vian11g00896 240 Pfam Plastocyanin-like domain 45 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00896 Vian-Chr11 10255754 10256986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00896 11 168 Phytocyanin Superfamily AT3G20570 49.704 1.87e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00896 - - gmx:100788637 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00896 11 10255754 10256986 Vian11g00896 11 10255754 10256986 ECH