Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00892 ATGCGTATAAACTTTACTGTCTCGAGTAAAAGGCGAACCGAGGTAATTCCCTGTGACCGAAAGGCTTTAGGCACTGGTTCAAATTTGACCGAGCTTATCACTATGGAGGAGAAAGAAATGTCTGATAATCAGTTAGGACTCAAGGATTTGGAAGTGATTTATGAGATGGATACCTTGCAAAACAATAATGGGTGTGGATCATCGGCATTTGATTCTGCACAGTTTGCTGATTCTGCACAGTTTGCAGATGCTAATATTCCTTTATTGGATTCTAGTTCCAAAGAAGACCGAGCCAGCGACCTTCTTTTAGGATTTTCTATATATACTATGAGAAGTGAAATCATTGAGCATGCATTTCGTGGCATGGATGAGTTGGCAAAGATTGGCATTGCAGAGCAACCTTTATGGCAGCGACAGCAGGGAAACAGTGGCTGTGAGATTTTGAATGATACTGAATATTTGAAGCAGTTTGGTGAGGTTGATACCATGCTAAGCGAGATTGTTAAGTTGATGGAGGTTGGAGAGTCTCAAAATTTACCTAGTTTTGACACATATCAAACTGAGCATCCAATAACAACTACTGTGACTCCCACTGTAACTTCACACTCTGAAGGTTCAAGAGCTATGACCTATATAAACATGGCACCAATCTGCATTGTTGAATTACTCATGGATGTGAATCAATGGTCTGAAGTGTTTTACAATATTGTCTCAAAAGCGACAATAGTAGGAACTTTGTTAGGAGGGGATGGAAGCTATGATAACAGATTGCAGGTGATGAGCGCAGAACTTCATTTGCCTACGCCTGTTTTATTGACCAGGGAGTGTTATTTTGGAAGGTACAGCAAGCAGTTATCTCATAACACATGGGGGGTTGTAGATGTATCATTGGAGAAATTTCTTCCTTCCCCGACCACCAATTTTCGGAAAAAACCATCTGGATGTTTAATTAAGTTAATGCCTAATGGACACTCTAAGGTCACATGGGTGGAGCATGTAGATGTAGAAGATAGTCAAGTGGACCAATATTTCCAGTCTCTATTCACCTCCACTCTAGCTTTTGGCGCAAGCCGTTGGATTAATTCCTTAATTCGATATGGTGAATGGTTACAAAGACTATTCGTAACACCGTTGGTTGCTGAAGAAGGAGTTTTTATAGCCCAAATGGGGAGGACCAGTTTGCTGCAACTGGCAGATAGAATGATGAAAACATTTTGTGGAAACATGAGTTCCACCGCAGACAATCCATGGACCCAAATGGCTCATTCCCCATACGTAAGAATCATGGTGAAGAATAACATGGAAGAAGCTGGAAAGCCTCCAGGTACATCCGTCGTTTTCACAACTTCTGTTTGGCTTGATGTCTCCCGGAATCGACTGTTCAACTTCCTCCGCCATGAGAATTCCAGAACCAAGTGGGATTTACTTTCACATAGACATACTATTCGAGAGTTTGCTTCAATGCTGAAGGGTGAAAATCCAGGAAATCGTGTTTCCCTGATGAGAGCCCATAATTCACAGGGCAAGCTTGTAATCTGTTTTCTGCAAGAGAGTTACACAGACTCAACAGGTTCGTATATAGTGTATGCTCCACTGGATGCGTCAGCTGTGGCAGCTCTTGTACACGGAGCCAACCCTGACAAAGTGATGATCCTACCATCAGGGTTTAGCATTCTTCCTGAAAGGTTGCAAGGAGATGAAGATAGAAACAGTCGAAGTCTTCTAACTATTGCATTCCACATAGTTGAAAGTACCACTAGTAAGCCATATCTCGCTCCTGAATCAATCGAAACCATATACAAAGTCATTTCAGATACTGTTTACTCTATAACAAACTCAGTGCTGTATCATAATCATCGCAATAATTGGATGGATGATTCAAATTTCTAG 1890 0.4143 MRINFTVSSKRRTEVIPCDRKALGTGSNLTELITMEEKEMSDNQLGLKDLEVIYEMDTLQNNNGCGSSAFDSAQFADSAQFADANIPLLDSSSKEDRASDLLLGFSIYTMRSEIIEHAFRGMDELAKIGIAEQPLWQRQQGNSGCEILNDTEYLKQFGEVDTMLSEIVKLMEVGESQNLPSFDTYQTEHPITTTVTPTVTSHSEGSRAMTYINMAPICIVELLMDVNQWSEVFYNIVSKATIVGTLLGGDGSYDNRLQVMSAELHLPTPVLLTRECYFGRYSKQLSHNTWGVVDVSLEKFLPSPTTNFRKKPSGCLIKLMPNGHSKVTWVEHVDVEDSQVDQYFQSLFTSTLAFGASRWINSLIRYGEWLQRLFVTPLVAEEGVFIAQMGRTSLLQLADRMMKTFCGNMSSTADNPWTQMAHSPYVRIMVKNNMEEAGKPPGTSVVFTTSVWLDVSRNRLFNFLRHENSRTKWDLLSHRHTIREFASMLKGENPGNRVSLMRAHNSQGKLVICFLQESYTDSTGSYIVYAPLDASAVAALVHGANPDKVMILPSGFSILPERLQGDEDRNSRSLLTIAFHIVESTTSKPYLAPESIETIYKVISDTVYSITNSVLYHNHRNNWMDDSNF 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00892 629 SUPERFAMILY Bet v1-like 389 581 - -
Vian11g00892 629 SMART START_1 160 369 IPR002913 GO:0008289
Vian11g00892 629 ProSiteProfiles START domain profile. 107 372 IPR002913 GO:0008289
Vian11g00892 629 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 87 613 IPR042160 -
Vian11g00892 629 Pfam START domain 192 364 IPR002913 GO:0008289
Vian11g00892 629 SUPERFAMILY Bet v1-like 201 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00892 Vian-Chr11 10213978 10231690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00892 100 614 Homeobox Transcription Factor Family AT4G04890 38.476 5.29e-112 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00892 K09338 - jre:108992281 491.115