Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00888 ATGGTTATTACCACCACAGATGAGCATATTTTGAAAGTGTACGAGGGTTATGTGTTGATACACAAGGTTCCATTATTGAATGATAAGGATGCTGGTGAATTGTTCTATAGAAAGGCTTTCAAAAGTGAAGAGCAAAACAGTAATTGTGCCGCAATGATTCCTGAAGTACTCAAATACGCTCAATGTCTTCCATTGGCAATTAGAGTGTTGGGTTCTTTTTTGTGTACTCGAGATGCTGATGAATGGAGAGATGTGTTGAATAGATTGGAGAATAGTCCAGATGACAAAATTATGAATGTACTTCAAATAAGTGTTGATGGACTACAACGTGAGGAAAAACAAATATTTTTACACATTGCTTGTTTCTTTAAAGGGGAGAGGGTGGATTATGTTAAGCGAATTCTAGACGGTTGTGGGTTACATCCTCGCATTGGAATTTCAAGACTCATTGAGAAATCACTCATCACTATTAGTAATGAAGAAATTCTTATGCATGAATTGTTACGAAAATTAGGAAAGAAAATGGTTCGTGATGAATCACCAGAGGAGCCAGGATCATGGAGTAGAATATGGCTTCATCAAGACTTCTTTCAAGCCTTGACGAGAGAAACGAGAGGGTGA 621 0.3752 MVITTTDEHILKVYEGYVLIHKVPLLNDKDAGELFYRKAFKSEEQNSNCAAMIPEVLKYAQCLPLAIRVLGSFLCTRDADEWRDVLNRLENSPDDKIMNVLQISVDGLQREEKQIFLHIACFFKGERVDYVKRILDGCGLHPRIGISRLIEKSLITISNEEILMHELLRKLGKKMVRDESPEEPGSWSRIWLHQDFFQALTRETRG 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00888 206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 119 IPR027417 -
Vian11g00888 206 Gene3D - 25 109 IPR042197 -
Vian11g00888 206 SUPERFAMILY "Winged helix" DNA-binding domain 95 200 IPR036390 -
Vian11g00888 206 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 197 IPR044974 GO:0006952
Vian11g00888 206 Pfam NB-ARC domain 1 99 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00888 Vian-Chr11 10185702 10186766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00888 1 191 WRKY Transcription Factor Family AT5G45050 34.375 7.39e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00888 - - vum:124842545 334.724