Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian11g00887 | ATGCTGAAAACTAAATCAGGGCTTCAACGGTTTTGGGACCGTTTCGGTACTCGATCATCGGGATCCACTTCTTCTTCATACGACTCCTCGGACACCATCCAAAACCAACACTACAGATACGATGTGTTTATCAGTTTCAGAGGTCCTGACGCCCGCAACTCTTTTGTTGATCATCTCTGCTCTCATCTCCTCCGAAAGGGCATTTTCGTCTTCAAAGATGACCACAATCTACAGAAAGGAGAATCCATTTCCCCACAGCTTCTACAAGCAATTCAACTTTCACGCCTTTCTATCATTGTCTTTTCCAAAAATTATGCTTCTTCCACCTGGTGTTTAGACGAAATGACCGCCATAGCTTCTTGCAAACAACAATCAAGCCAAATTGTTTTCCCCATTTTCTATGATGTAGATCCATCTCATGTAAGACATCAGAATGGGGTATACAAGAATAACTTCCTTTCACACAGATGGAAATTTGGAAAAGATCGGGACAAAGTTCTTGGATGGAAGAGGGCTATGACGGATTTGGCCAATTCAGCTGGTTGGGATATGAGGGACAAGCCAGAGTTTGCACAGATTCAAAGCATTGTTCAAGCAGTAATTAAAAAATTAGGTCATAAGTTTTCAAGGTCTGTGAATGACCTTATTGGGATACAACCACGCGTACAAGCATTAGAAGACAAATTAAGATTAAGCTCAAAAAGTGATGATGTTCGAGTTTTAGGAATTTGGGGAATGAATGGAATAGGAAAGACTACTCATGCAGCTGTCCTATATGACAAAATCTCTCATATGTTTGATGCTTCTTGTTTCATTGAGGATGTGAACAAACTTTATAGGGATGGTGGCCATACTGCTGTTCAAAAGCAAATTATTCATCAAACTTTTCGTGAAAACATAGATATGAGTAATCCTATTGAAATATCAGGGATTGTAGAAAATAGGCTACACAGCATAAAGGTCCTCATAGTTCTGGACAATGTTGATGAATTAGAGCAATTGGAAAATTTGGCCATAAAACCTAGATTGCTTTTGAAGGGAAGTAGGATGGTTATTACAACGACAGATGAGCATATTCTGAAAGTGTATGAGGGTGATGTGTTGAGACACAAGCTTCCATTATTGAACGATGCGGATGCTCGTGAATTATTCTGTAGAAACGCTTTCAAATGTGAAGATCAAAGCAGTAATTGTGCGGCGTTGATTCCTGAAGTACTCAAATATGCCCAATGCCTTCCACTGGCAATTAAAGTGTTGGGTTCTTTCTTGTGTACTCGAGATGCTGATGACTGGAGAGATGTGTTGAATAGATTGGAGAATAGTCCAGATGACAGAATTATGAATGTACTTCAACTAAGTGTTGATGGACTACAACGTGAGGAAAAACAAATATTTTTACACATTGCTTGTTTCTTTAAAGGGGAGAGGGTGGATTATGTTAAGCGAATTCTAAAATGTTGTGGGTTACACCCTGACATTGGAATTTCAAGACTTACTGAGAAATCACTCATCACTATTAGCGATGAAGAAATTCATATGCATGAATTGTTACAAGAATTAGGAAAGAAAATGGTTCGGGACCAATCTCCGGAGGAACCAGGATCATGGAGTAGAATATGGCTTCATAAAGACTTCTTGCATGCCTTGACAGCAGAAACGGGAACAGAGAAGGTGAAAGCCATAGTTTTAAATAAAAAAGAAGAAATGTCAGAATGTATTGTTGACGGATTGTCAAGAATGAAGGAACTTACATTACTGATATTATATCACACAAGAGTTTCAGGAAGGCTGGAGGTTCTTTCAGACAGACTACAATATCTATTGTGGCATGATTATCCTTTTGCTTCTCTGCCTCCATACTTTACAGCCTTTAATCTTGTGGAATTGAATATGCCTAACAGTCACATCACACATTTATGGGAAGGCGGCAAGAGCTGTCCCAACTTGAAAAGGATTGATTTAAGCAACTCCAAGTACCTGAGTGAGACTCCAGATTTTTCCAGAATCATAAAACTTGAAAGGCTAGATCTTTCTGGATGTTCAAGTTTATCTTATGTCCATTCATCAATTGGACTTCTTAAGAAACTTGCTTTCTTGAATTTACGAAATTGTTGCAATCTAGTTTGCATTGACTTTGGCTGTGTATGGAATATGAGTTCTCTGAGAGTTCTACATCTCTCGGGTTGTTCTAAACTGGAAAGCACCCCAGATTTTACAAGGGCAACACATCTTGAGTACCTTGACATGGATGAATGTACAAGTTTATCCACTATTCATGAGTCTATTGGAGTCCTTTCAAGTCTTACTTTCTTGAGTTTGAGAGGTTGCATAAAGCTTGTCAGTATACCAAATGATATCAATTCCTTGGTATCTCTTCAAACTCTAGATTTATCCTGTTGTTATAACGGATGGAATCCGATACCAAGACAAGCTCTTTCGTCCCATTTTAAATCCTTGATTTTTCTGGACATAAGTAATTCCTATCTAGAAGAAGTACCTGATGCTATTGGAGACTTAAGATGTTTAGAAAGACTGAATCTACAGGGAAACAGATTATTTTCAATACCTGATTCCTTCCGTCAGCTTCATTGTCTAGCATATTTAAACTTGTCTCATTGTCGTTACCTTAAAAATTTGTCAGGCCTTCCAACTGAAGGAGATAAATCAGGGGGGAAGTATTTTAAAACGGTATCTGGATCTCGTGATCATAGATCAGGATTTTATCTTTTTAATTGTCCCGATGTGTCTCATGATAGACTTGAGTTCGCCGGACTTGAACGCTTCTTCCACCTAATTAAGGAACCCTGTAATTTTCGGTGTGGCTTTGACCTTATTCTTCCTTGGGATATGGGATTTCGACCTGTCTTCGGTGACACATTCTTAGGGAATTCAATTATAAGGATACTTCAATGTGTTATGAATGACAACTGGATTGGCTTTGGCTTTTATGTTATATTTAGTCGTGGGATTGATTTTTCTTCTTCTCACTGTTCATTATCCCATCTACTTTATCTTTCTTTTGAAAGTGAATACACAGAAGAGTACTTTGATATGCGATTTAATTCGGAGAGAGATGAATACTTTAGGTCTAGGCATATTTGGATAATTTACATGAGTCGAGAACACTGTCATTTTGTGAAAACAGGGGCGCATATCACATTTAAAGCGCAACCAAATGTTAAGATCGATGCATTGGGATTGAGACCTATACTCAAACAAGATATAAGTGACAGTAAAGGGAAGAAATACATAAAATTTTCCAAATTAAATCATGATCATTTGGACTTTGAGTATGTAGAAAAAAGCAACAGTGGTTCAGGGCCGAAAATCCAGCTTCCTTACAATTGGTATGTCACAGAAGAAGAGCAAGTTGAGAATATTGATGCAAAGGCCAAAGAAAATAATCTCTCCAATGCAGGGCTTTAA | 3426 | 0.3809 | MLKTKSGLQRFWDRFGTRSSGSTSSSYDSSDTIQNQHYRYDVFISFRGPDARNSFVDHLCSHLLRKGIFVFKDDHNLQKGESISPQLLQAIQLSRLSIIVFSKNYASSTWCLDEMTAIASCKQQSSQIVFPIFYDVDPSHVRHQNGVYKNNFLSHRWKFGKDRDKVLGWKRAMTDLANSAGWDMRDKPEFAQIQSIVQAVIKKLGHKFSRSVNDLIGIQPRVQALEDKLRLSSKSDDVRVLGIWGMNGIGKTTHAAVLYDKISHMFDASCFIEDVNKLYRDGGHTAVQKQIIHQTFRENIDMSNPIEISGIVENRLHSIKVLIVLDNVDELEQLENLAIKPRLLLKGSRMVITTTDEHILKVYEGDVLRHKLPLLNDADARELFCRNAFKCEDQSSNCAALIPEVLKYAQCLPLAIKVLGSFLCTRDADDWRDVLNRLENSPDDRIMNVLQLSVDGLQREEKQIFLHIACFFKGERVDYVKRILKCCGLHPDIGISRLTEKSLITISDEEIHMHELLQELGKKMVRDQSPEEPGSWSRIWLHKDFLHALTAETGTEKVKAIVLNKKEEMSECIVDGLSRMKELTLLILYHTRVSGRLEVLSDRLQYLLWHDYPFASLPPYFTAFNLVELNMPNSHITHLWEGGKSCPNLKRIDLSNSKYLSETPDFSRIIKLERLDLSGCSSLSYVHSSIGLLKKLAFLNLRNCCNLVCIDFGCVWNMSSLRVLHLSGCSKLESTPDFTRATHLEYLDMDECTSLSTIHESIGVLSSLTFLSLRGCIKLVSIPNDINSLVSLQTLDLSCCYNGWNPIPRQALSSHFKSLIFLDISNSYLEEVPDAIGDLRCLERLNLQGNRLFSIPDSFRQLHCLAYLNLSHCRYLKNLSGLPTEGDKSGGKYFKTVSGSRDHRSGFYLFNCPDVSHDRLEFAGLERFFHLIKEPCNFRCGFDLILPWDMGFRPVFGDTFLGNSIIRILQCVMNDNWIGFGFYVIFSRGIDFSSSHCSLSHLLYLSFESEYTEEYFDMRFNSERDEYFRSRHIWIIYMSREHCHFVKTGAHITFKAQPNVKIDALGLRPILKQDISDSKGKKYIKFSKLNHDHLDFEYVEKSNSGSGPKIQLPYNWYVTEEEQVENIDAKAKENNLSNAGL | 1141 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian11g00887 | 1141 | Pfam | Leucine Rich Repeat | 625 | 642 | IPR011713 | - | |
Vian11g00887 | 1141 | SUPERFAMILY | L domain-like | 527 | 881 | - | - | |
Vian11g00887 | 1141 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 36 | 206 | - | - | |
Vian11g00887 | 1141 | Gene3D | Ribonuclease Inhibitor | 715 | 805 | IPR032675 | - | |
Vian11g00887 | 1141 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 211 | 468 | IPR027417 | - | |
Vian11g00887 | 1141 | Gene3D | - | 374 | 458 | IPR042197 | - | |
Vian11g00887 | 1141 | PRINTS | Disease resistance protein signature | 315 | 329 | - | - | |
Vian11g00887 | 1141 | PRINTS | Disease resistance protein signature | 409 | 423 | - | - | |
Vian11g00887 | 1141 | PRINTS | Disease resistance protein signature | 716 | 732 | - | - | |
Vian11g00887 | 1141 | PRINTS | Disease resistance protein signature | 240 | 255 | - | - | |
Vian11g00887 | 1141 | Gene3D | Ribonuclease Inhibitor | 806 | 1014 | IPR032675 | - | |
Vian11g00887 | 1141 | Pfam | TIR domain | 40 | 210 | IPR000157 | GO:0007165 | |
Vian11g00887 | 1141 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 40 | 733 | IPR044974 | GO:0006952 | |
Vian11g00887 | 1141 | ProSiteProfiles | Leucine-rich repeat profile. | 841 | 862 | IPR001611 | GO:0005515 | |
Vian11g00887 | 1141 | Gene3D | - | 205 | 367 | IPR027417 | - | |
Vian11g00887 | 1141 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 30 | 182 | IPR035897 | - | |
Vian11g00887 | 1141 | Pfam | Leucine rich repeat | 822 | 874 | IPR001611 | GO:0005515 | |
Vian11g00887 | 1141 | SMART | till_3 | 39 | 179 | IPR000157 | GO:0007165 | |
Vian11g00887 | 1141 | Gene3D | Ribonuclease Inhibitor | 494 | 714 | IPR032675 | - | |
Vian11g00887 | 1141 | ProSiteProfiles | TIR domain profile. | 38 | 204 | IPR000157 | GO:0007165 | |
Vian11g00887 | 1141 | Pfam | NB-ARC domain | 224 | 444 | IPR002182 | GO:0043531 | |
Vian11g00887 | 1141 | Gene3D | - | 33 | 204 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian11g00887 | Vian-Chr11 | 10156635 | 10163598 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian11g00887 | 714 | 871 | WRKY Transcription Factor Family | AT4G12020 | 37.017 | 1.35e-14 | 77.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian11g00887 | - | - | vra:106778496 | 1882.07 |