Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00879 ATGGGAGAAAGCTATGACGGATTTGGCCAATTCAGCTGGTTGGGATATCAGAAACAAGGAACAAATGATGTTAAAGCCATAGTTCTAAATAAAAAGGAGGCTATTTCAGAATTTAGCATTGATGGATTGTCAAAAATGAAGAACCTTAGATTACTCATATTATATCATAAAAGCTTTTCGGGAAGCCTTAGTTTTCTTTCTCAAAAGCTGCGGTATCTTTTGTGGCATGATTATCCTTTTTCTTCTTTGCCATCAAGTTTTGCAGCTCCTGGCCTTGTGGAACTGAACATGCCTAATAGTAGCATCAATTGCTTATGGGAAGGCCGCACGCATTTCCCATGTCTGAAAAGAATGGATTTGAGTAACTCCAAATATCTTACGGAGACTCCTGATTTTACTGGGGTCCCAAACCTTGAGCGTCTGGATCTTTCAGGATGCACAGATTTATCATTTGTCCACCCATCAATTGGGCTTCTTCAACAGCTTGCTTTCTTGAGTTTAAGAAATTGCAGCAATCTCATCAGCATCAAATTTGGCAATGGATTTAATGTAAGTTCCTTGAGAATTCTACATTTCTCTGGTTGCACTAAACTTGAAAACACGCCAGATTTTACATGGACAACAAATCTTGAGTACCTTGACTTCAATGGATGTACAAGTTTGTCCTCGGTTCATGAATCTATTGGAGTCCTGGCAAAGCTTACATTCTTGAGTTTGAGAAACTGCACAAGCCTTGTTAGTATACCTAGCAACAATAATATCATGAAATCTCTTCAGACTCTAGATTTCTCTGGCTGTTTTCAGCTTACTGATTATTCCTTAGGGAGATCTTTCATTTCTTTATCCATGATCTCTTTGATTCTTTTGGACATAGGCTTCTGCAACCTTCTTAAAGTACCCGATGCTATTGGAGACTTGTTGTATTTAGAAAGACTGAATCTGCAGGGAAACAATTTTGTTTTTATACCATCTTCAATTAGCAAGCTTTGTAGTCTAGCGTATTTAAACGTGTCCCATTGCCATAGGCTTCAACGTTTGCCTTACCTTTCAACAAGAAGTTCTTCATCAACGGGAAGGTACTTCAAAACGGTATCTGGATCTCGTGATCATAGATCAGGCCTATATTTTTTCGATTGTCCGGAGATAAATTGGATTGATCCACCCTATTACCAAGAACTTACATGGCTTTTAAGACTAGCTAAGAATCCATGTTATTTTCGGTGTGGCTTTGACATTGTTGTTCCTTGGGGTTTGGAACTTCCAGGTTGGTTAAAACAGAGATTTAAAGGGGATTCGGTTATAAGGATAGTGGAATTTAATGAGGATGACGACTGGATTGGGTTTGTTTTTGGTGTTATATTTGAGCGAAAGAATGGTCATGTGGTTGCGAGGTCTTCATCACATCCATTTTATCTGTCTTTTGAAAGTGAAGAGACAGAAGAATACTTCGACATGCAACTGAATTTGGAGCGGGACAAAGTGGATGGATCAAAGCATCTTTGGATTATTTACATCTCTCGAAAACACTGTCACTTTCTGAAAACAGGATCACATATCTCATTTAAAGTGCATCCAAGTCTTGAGATTAATGCATGGGGGATGAGTAGTATATTCCGGGAAGATGAAGAAATTAACTTTGAGTGTAAAGGCCGCCATGTGAACTTTGATTTTGTAGAAAAAAGCAGCACCAAGTCTGGTCCTAAATTCAAGCTTTCTTACAATTGGTTGGTCACAGATGAAGATGAAGTTGAGAATATTAATGCAAAGGCAAAAGAAAACAATTTGTCTTATGCAGGCCTTTAA 1803 0.3827 MGESYDGFGQFSWLGYQKQGTNDVKAIVLNKKEAISEFSIDGLSKMKNLRLLILYHKSFSGSLSFLSQKLRYLLWHDYPFSSLPSSFAAPGLVELNMPNSSINCLWEGRTHFPCLKRMDLSNSKYLTETPDFTGVPNLERLDLSGCTDLSFVHPSIGLLQQLAFLSLRNCSNLISIKFGNGFNVSSLRILHFSGCTKLENTPDFTWTTNLEYLDFNGCTSLSSVHESIGVLAKLTFLSLRNCTSLVSIPSNNNIMKSLQTLDFSGCFQLTDYSLGRSFISLSMISLILLDIGFCNLLKVPDAIGDLLYLERLNLQGNNFVFIPSSISKLCSLAYLNVSHCHRLQRLPYLSTRSSSSTGRYFKTVSGSRDHRSGLYFFDCPEINWIDPPYYQELTWLLRLAKNPCYFRCGFDIVVPWGLELPGWLKQRFKGDSVIRIVEFNEDDDWIGFVFGVIFERKNGHVVARSSSHPFYLSFESEETEEYFDMQLNLERDKVDGSKHLWIIYISRKHCHFLKTGSHISFKVHPSLEINAWGMSSIFREDEEINFECKGRHVNFDFVEKSSTKSGPKFKLSYNWLVTDEDEVENINAKAKENNLSYAGL 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00879 600 Gene3D Ribonuclease Inhibitor 15 180 IPR032675 -
Vian11g00879 600 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 183 360 IPR044974 GO:0006952
Vian11g00879 600 SUPERFAMILY L domain-like 35 407 - -
Vian11g00879 600 SMART LRR_CC_2 135 157 IPR006553 -
Vian11g00879 600 SMART LRR_CC_2 255 280 IPR006553 -
Vian11g00879 600 SMART LRR_CC_2 207 234 IPR006553 -
Vian11g00879 600 Gene3D Ribonuclease Inhibitor 182 279 IPR032675 -
Vian11g00879 600 Gene3D Ribonuclease Inhibitor 280 366 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00879 Vian-Chr11 9949602 9955773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00879 183 352 WRKY Transcription Factor Family AT4G12020 35.088 1.04e-15 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00879 - - var:108332841 1174.46