Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00875 ATGACGACATCCATTGACCGCACCCCACAGTCCAACGTTGTCGGAGCCTTGGCGACATCCAGTGGTTGTACTAATCAGCTACTCCATTGTTGCAAACTTGTGTTGGGAAGTATCATTATCTACACATTCTCAAGTGGGTTCTATAATGGCACCTCAACTCTTGCTGGTATTATTGGCACCGTGAAGGCTCAGGGAATGGAGGGCTTTGTTTTAGTTGCAAACCCAAGCTATGGTGATTATATTGCAGAGCCAATGCCTTTGATCCCTCGTGTGGAGGATGCCAAGGCTATATTACATTACTATGAAGAAAAAACAAAGAGGAACAAGAAAGGAAATGCCAAAGAGTTTGGTGCTTTGGCAGCTGTGGGAGAAGGAAGACTTGCCTCTTTCACAGGAAGATCACTGATAGACACCAAATCTGGGCAGCCTGGGCCCCATCAGTGCTTCAGAACCTTTCCTCAGAGCATATCCACACCTCATGTGGCTGGAATAGCAGCACTGATGAAGCAACACAATCCATCATGGACTCCATCCATGATAGTTTATGCGATCTCTACAACAAGCTCAAAGTATGACCATCTTGGACATGCTATAATGGAAGAAGGCTATGAGGTCAACACCTTGCTACCCGCCACTCCTTTTGATTACGGCTCAGGCTTTGTCAACCCCAATCGTGTCGTTGATCCTGGTTTGGTACTTTCATCAGGTATGAAATTTAAACCACATTGTACGAATAACATTGTCAGTGCTCGTGGTTTCAGTGTAATGAAGATCACTTCTTTCCCCGGGAGTCTGTGTATGGGAAAATCTGCTCCTCTCAACGGATTTTTATGGGATGTCTCTCTGCAAGCGAAATGGAACTCTCTGAGGATTACACTCCTAGTGACCAAGGTGTCAGGTTCGGGAGCCAATTTTGACGTCCATGACAGAGGGTTTCGTGTAGGGGGCGATGAGGTCCTAGAGGAGAAGGTGGGTGTGGGGGCCGGAGTAGTCGGAGGCAGGGACGACAACGGTGCCGTGGAATGCCAGGAAAAAGGGGCGGATGGAGGGTGGGACGACGAGTGA 1065 0.4808 MTTSIDRTPQSNVVGALATSSGCTNQLLHCCKLVLGSIIIYTFSSGFYNGTSTLAGIIGTVKAQGMEGFVLVANPSYGDYIAEPMPLIPRVEDAKAILHYYEEKTKRNKKGNAKEFGALAAVGEGRLASFTGRSLIDTKSGQPGPHQCFRTFPQSISTPHVAGIAALMKQHNPSWTPSMIVYAISTTSSKYDHLGHAIMEEGYEVNTLLPATPFDYGSGFVNPNRVVDPGLVLSSGMKFKPHCTNNIVSARGFSVMKITSFPGSLCMGKSAPLNGFLWDVSLQAKWNSLRITLLVTKVSGSGANFDVHDRGFRVGGDEVLEEKVGVGAGVVGGRDDNGAVECQEKGADGGWDDE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00875 354 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 155 234 IPR045051 -
Vian11g00875 354 Pfam Subtilase family 155 191 IPR000209 GO:0006508|GO:0008236
Vian11g00875 354 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Vian11g00875 354 SUPERFAMILY Subtilisin-like 155 231 IPR036852 GO:0004252|GO:0006508
Vian11g00875 354 Gene3D Peptidase S8/S53 domain 155 235 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00875 Vian-Chr11 9868006 9872485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00875 34 238 Subtilisin-like Serine Gene Family AT1G62340 43.426 2.64e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00875 - - gmx:100798915 260.766