Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00861 ATGGATGAGAGAATTTGTATATCTGAGGAAGAAAAGAGTGAAAGTAGCAGACCCTCTTCTGCAAGGCTTAGAAGAAAACGTTCATTCTTCGATTTGAATGAAGAAGCTGTGGATGATGGAGATGGTAGCACCAGTGATGATCCCATCAGTAACAATGAGATATCATCTCAAGAGGGTAATTTGAGTAGTAACAATAACTCAAGTGATGAAGGGAAAGAGCGTGGAACTGCTGTTAGGCAATATGTTCGGTCCAAAATGCCAAGACTCCGTTGGACCCCTGATCTTCATTTAGCTTTTGTGCATGCTGTCGACAGGCTTGGTGGACAAGAAAGAGCAACCCCCAAGTTGGTTCTCCAGTTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAGAGCCATTTACAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTGTCTCAGAATAGGGCAATGCAGGGAAGGCACAGTATTTTCGATATGTATGGAAGACTCAATGCCCCACGACACTTTGTCGTTGATAACAGAAATTATGTTCCATCATCTCTGCTCATGGAACAATCACCTTATCAGATCAGTGCTCACTCTTCAAGATTACACCCGACAGGGTTTTTCAATAGTCACCACATGATGATAAGATCTAGTTCAGTGTGGGACAAAGATCTGCGTAATTATCAGTATCAGCGTAGTTCTTGCAGTCCTAACTTCACTGGCCACGCCAAGTTTGATGCCGAGGTTGGTGATGTGAAAAATGGAATGCCAGAATTCCTTAATCAGGTTCAAGTAAGGAAGCAAGGTGAAATGAAAGATGAATATGAGAAGAAAGGGAGTATGAGTATTTTGGAGGTGAATTTAAGTAAAGATTCAAGAAAAGTTAAGAAAGATGATGCAGAAAGTGAAGAAGAAATTAATACGAGACTGTCTCTTTCACTGTTCACTTCATCATCCTCAAATTCATCACAACAAGCACAGTGTAGTGAAAATCATAAAGACGATACTCATGTTGAGAGTTTTTGTTTACAAAATTATGCAGCGAGGAGTCGTTTGGGCTGA 1065 0.4066 MDERICISEEEKSESSRPSSARLRRKRSFFDLNEEAVDDGDGSTSDDPISNNEISSQEGNLSSNNNSSDEGKERGTAVRQYVRSKMPRLRWTPDLHLAFVHAVDRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRAMQGRHSIFDMYGRLNAPRHFVVDNRNYVPSSLLMEQSPYQISAHSSRLHPTGFFNSHHMMIRSSSVWDKDLRNYQYQRSSCSPNFTGHAKFDAEVGDVKNGMPEFLNQVQVRKQGEMKDEYEKKGSMSILEVNLSKDSRKVKKDDAESEEEINTRLSLSLFTSSSSNSSQQAQCSENHKDDTHVESFCLQNYAARSRLG 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00861 354 MobiDBLite consensus disorder prediction 317 336 - -
Vian11g00861 354 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 142 IPR006447 GO:0003677
Vian11g00861 354 SUPERFAMILY Homeodomain-like 85 141 IPR009057 -
Vian11g00861 354 MobiDBLite consensus disorder prediction 44 71 - -
Vian11g00861 354 Pfam Myb-like DNA-binding domain 89 139 IPR001005 -
Vian11g00861 354 Gene3D - 86 143 - -
Vian11g00861 354 MobiDBLite consensus disorder prediction 1 34 - -
Vian11g00861 354 MobiDBLite consensus disorder prediction 1 76 - -
Vian11g00861 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 143 IPR017930 -
Vian11g00861 354 FunFam Myb family transcription factor 85 143 - -
Vian11g00861 354 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 64 271 IPR046955 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00861 Vian-Chr11 9601859 9604643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00861 78 209 G2-like Transcription Factor Family AT2G42660 50.355 8.80e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vian11g00861 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00861 - - vun:114183967 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00861 11 9601859 9604643 Vian11g00861 11 9601859 9604643 ECH