Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00859 ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTGTCGTGGTGGCCTTCAGATTTTGTTGAAAATTTTGGATCTGTTTCTTTGGATTCTCATGATGAGTCACTAAGTAATAAAGAATCTCCTGGACATGTTGTCAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGCGCACTGGGATGCTTTCAGAACCCATACCAAATGGTTTTTACTCTGTTGTTCCGGAAACAAGACTAAAGGAACTTTTTGATAATATTCCTTCCTTGGACGAGCTTAATGCTTTGAGTGGAGAGGGTTTTAAGACTGATGTCATTCTCGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTGAAGCAATTGATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCGGCTGCCATAATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGTCCCAATGTTGAAAGTCCAGCAAAAGCTGTGCTAGATGAAACCTCTCACATGTTAGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTTGGTCTTGAAAGTAGGCTTGTGCTGGGCTTGCCAAATGATGGAGTTACTGAATGTCAAGACTCGTACAAGCATATGTCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGTTTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGGTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCGAACAGCCCTTTATTTGGGGTTTCAGAGAGTGTTGAGAAGGAGGAAAGCCTCCAGTTCCATAGAAAATTTGAACCATCTTCAAATGCATTGGGCCTTTCCTTGAGAAATGTGATGTTAAGATCAAATACCAGTTTGAGCTTGTCTCATAGTGAACCCAACATTGGCACTACATTAGGTCGGCGTAGTCGGAGAAAGATCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGGGCGGTCCATGCTTAGCGGTGATAGGACAGCATTTAGAGATTTTACTGATGATCAGGCTACATCAAGGTTCTCATCTTTTTTATCCTTACATAACTTCTTTTGCACTGTTAAGTTTATTACCCCTCTTGTTTTTATATGGTTTATAAGAGAAGTTTGTCCATTTCTCAGATCTAGCTATAGGTCAGATGGTGCATCCTCCTCGTCAGAAGCCCGTAGGATAAGAAGAAGAAGCGTCAGCATTACACCTGAGATTGGAGATGATATCGTCATTTTTCTGTACTTGATATTACTCAATTCCAGTGCTTGGCAATTAAAAGGAGAACCGGGGCAAAAACAAAGTTGTAAATATAGAGCTTCTAGTGAAGCTAATCGGGCTGTACGTGCTATGAATGAAACTCTGAAGCAAAATCGTCTCTTGAGAGAACGAGGGGATGATAACTCTACGAACAATAACAGTAGTGATGCAAATCTTCAGAAAAATGTGTCAAATTTTCATCTTGATGGTCATGATGCACTATATTCTCGTCAACATGACCAAGGAAACTCACAAAAGGCAATGTCATTACCATCTTCACCTCATGATTATAGAGGTCATTCTTCGGAGGGAATTGGACTGTCGAGACAAGGAGTGAATGATGAAATGGAGTCAACTTGGAATAAAGTACTGGAATCTCAAATGTTCAATAATAAACCTCTTTTACCATACGAAAAATGGAATATTGACTTCTCTGAATTGACTGTTGGAACTCGGGTAGGAATTGGTTTCTTTGGAGAGGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAATGAGATATCTATTCTGAGGGGTTTGATGTGCATACATCGAATGAAGGTTGTTCACCGTGATCTGAAAAGCGCAAATTGTCTGGTGAATAAGCATTGGACTGTGAAAATATGTGATTTTGGGCTTTCAAGATTAATGACAGAGTCTCCTATGAGAGATTCTTCCTCGGCTGGAACTCCGGAATGGATGGCTCCTGAGCTCATTCGAAACGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATAATGTGGGAACTATGCACATTGAGCAGACCATGGGAAGGAATACCACCTGAGAGGGTGGTCTATTCCGTTGCAAATGAGGCTTCCAGATTGGAAATACCAGAAGGCCCTCTAGGAAGGCTTATTTCAGATTGTTGGGCAGAATCCCATGAGCGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTGGTGGACATCGAGTACTCCTTGTGCTGA 2445 0.411 MEETREDAGPTEQGPSNVSWWPSDFVENFGSVSLDSHDESLSNKESPGHVVKDVLSSQKASQTLWRTGMLSEPIPNGFYSVVPETRLKELFDNIPSLDELNALSGEGFKTDVILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAVLDETSHMLENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVLGLPNDGVTECQDSYKHMSLIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSESVEKEESLQFHRKFEPSSNALGLSLRNVMLRSNTSLSLSHSEPNIGTTLGRRSRRKIIAEQRTASSSPEHPSFRARGRSMLSGDRTAFRDFTDDQATSRFSSFLSLHNFFCTVKFITPLVFIWFIREVCPFLRSSYRSDGASSSSEARRIRRRSVSITPEIGDDIVIFLYLILLNSSAWQLKGEPGQKQSCKYRASSEANRAVRAMNETLKQNRLLRERGDDNSTNNNSSDANLQKNVSNFHLDGHDALYSRQHDQGNSQKAMSLPSSPHDYRGHSSEGIGLSRQGVNDEMESTWNKVLESQMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILRGLMCIHRMKVVHRDLKSANCLVNKHWTVKICDFGLSRLMTESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGIPPERVVYSVANEASRLEIPEGPLGRLISDCWAESHERPSCEEILSRLVDIEYSLC 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00859 814 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 377 667 - -
Vian11g00859 814 MobiDBLite consensus disorder prediction 1 20 - -
Vian11g00859 814 ProSiteProfiles Protein kinase domain profile. 469 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00859 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Vian11g00859 814 Pfam Protein tyrosine and serine/threonine kinase 667 806 IPR001245 GO:0004672|GO:0006468
Vian11g00859 814 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
Vian11g00859 814 ProSitePatterns Protein kinases ATP-binding region signature. 623 644 IPR017441 GO:0005524
Vian11g00859 814 MobiDBLite consensus disorder prediction 548 578 - -
Vian11g00859 814 Gene3D Transferase(Phosphotransferase) domain 1 584 666 - -
Vian11g00859 814 SUPERFAMILY Protein kinase-like (PK-like) 591 806 IPR011009 -
Vian11g00859 814 Gene3D Transferase(Phosphotransferase) domain 1 667 813 - -
Vian11g00859 814 MobiDBLite consensus disorder prediction 505 530 - -
Vian11g00859 814 SMART serkin_6 617 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00859 814 MobiDBLite consensus disorder prediction 271 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00859 Vian-Chr11 9521147 9544436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00859 1 814 MAP Kinase Kinase Kinase AT3G58640 53.933 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Vian11g00859 EDR1 9.5e-57 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00859 - - gmx:100803469 1226.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00859 11 9521147 9544436 Vian11g00859 11 9521147 9544436 ECH