Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00849 ATGCGAAGCTGCATCATCAACCTCTGGATCGTTGTCGCACTCTTCGTCCCTGTTCTCCTCTCTCTCAGAAGCCGTCGAGGCGAAACCCAAATCCAAACCACTCCTTCTTCATCTTCTGCTGCTTCTTTCTCTGATTCTTCTTCCTTCTCCGTGAAGCTTGCCAACACATTCCAATTCAACCAAAGGATCCGAGACGGCTCCAATCTTGAATATGATTTCTACAAGGACACGTGTCCCCAAGCCGAGGGCATTGTCCGTTCAGCGCTCACGCGCATTTACTTCGACCACAGGGACGTTGCTCCTGCCCTGCTTCGTCTCTTCTTCCACGATTGCTTCATCCAGGGATGTGATGCTTCGTTGCTGTTGGATGAGAACGATGGTAATAGTAACAGTTCGGTGGAGAAGCAGGCTGTGCCAAATCAGACACTGAGAGGTTTTGACAAGATTGACTTGATAAAGGAGGAGGTGGAGCAAGCGTGTCCTGGTGTTGTGTCTTGTGCTGATATAGTTTCTCTTGCAGCAAGGGATTCTGTTCTTCTGGCTGGTGGGCCATTCTATCCAGTTTTAACGGGAAGAAGAGACAACCATCAATCGTTTTTCGAAGAAGCAACTGCTCAGATTCCCAGACCAGATGATAATGTTACACGCACATTGCATCTCTTTAATCTCAGAGGATTTAATGCAAGAGAAACTGTCAGCCTTCTTGGAGGACACAACATTGGAAAAATTGGTTGTGATTTCATTCTGCAAAGGTTATACAACTTTCAGGACACAAGACAACCAGATCCTAGTATACCTCCTGATTTCCTTCGTCAGATGAGGCTAAATTGTCCAAACAATTCAAACACCAACACCAATAAAGATGAGTTTATGACTTCAAAGCCTATGAGCAGTGATGTTCAGTCTAAATCAGGGATGTCATACATGCAAGCATTGTCAACTTCAGTGTCATCAGGTTCAACATTTGACACTCACTACTACCAAAGTCTGCTAAGAGGAAGAGGACTACTTTTTGCTGATCAGCAACTGATGGCTGAGGATAAAACTGCTAAATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACTTTTCGCATGGACTTTGCCAGAGTCATGTTGAAAATGTCTAATCTTGATGTTTTGACAGGACTTCAAGGTCAAGTTCGACTCAATTGCTCCAGACCTGTGACTTCTTGA 1197 0.447 MRSCIINLWIVVALFVPVLLSLRSRRGETQIQTTPSSSSAASFSDSSSFSVKLANTFQFNQRIRDGSNLEYDFYKDTCPQAEGIVRSALTRIYFDHRDVAPALLRLFFHDCFIQGCDASLLLDENDGNSNSSVEKQAVPNQTLRGFDKIDLIKEEVEQACPGVVSCADIVSLAARDSVLLAGGPFYPVLTGRRDNHQSFFEEATAQIPRPDDNVTRTLHLFNLRGFNARETVSLLGGHNIGKIGCDFILQRLYNFQDTRQPDPSIPPDFLRQMRLNCPNNSNTNTNKDEFMTSKPMSSDVQSKSGMSYMQALSTSVSSGSTFDTHYYQSLLRGRGLLFADQQLMAEDKTAKLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGLQGQVRLNCSRPVTS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00849 398 SUPERFAMILY Heme-dependent peroxidases 69 394 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 Gene3D Peroxidase, domain 2 208 375 - -
Vian11g00849 398 Pfam Peroxidase 85 359 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 Gene3D - 72 393 - -
Vian11g00849 398 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Haem peroxidase superfamily signature 100 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Haem peroxidase superfamily signature 164 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Haem peroxidase superfamily signature 315 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Haem peroxidase superfamily signature 182 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PANTHER PEROXIDASE 25-RELATED 47 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 ProSiteProfiles Plant heme peroxidase family profile. 68 396 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 MobiDBLite consensus disorder prediction 276 297 - -
Vian11g00849 398 ProSitePatterns Peroxidases active site signature. 100 111 IPR019794 GO:0004601
Vian11g00849 398 PRINTS Plant peroxidase signature 144 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Plant peroxidase signature 313 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Plant peroxidase signature 329 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Plant peroxidase signature 102 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Plant peroxidase signature 370 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Plant peroxidase signature 229 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Plant peroxidase signature 163 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Plant peroxidase signature 182 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 PRINTS Plant peroxidase signature 78 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian11g00849 398 CDD secretory_peroxidase 68 394 IPR033905 GO:0004601|GO:0042744
Vian11g00849 398 FunFam Peroxidase 72 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00849 Vian-Chr11 9327115 9329332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00849 65 394 Peroxidase AT4G33870 45.294 1.11e-98 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00849 K00430 - gmx:100804973 668.692