Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00836 ATGATGCCTGCAACTCCACCACAGATCAATCCTACGAATAAGCTTCGTCATATTGGGGTTCCTGGAATCATTACTAGTAGGAGAGAAATTATAAGTGAGCCTAGTCCAAGCATGGTTAATGATACCATCTGTGTTGTTGTGGCAAAAAATGTGAAAGACAGCAAATTAAATCTCATATGGGCAATACAAAATTCTGGAGGAAGTAGAATTTGCATCCTTGATGTTCACGTGCCAGCACCTATGACTAAGTTTGCAACATGGGTCTGCACTTGCAATTTGGGTGCTAAATTTCCTGAAAGTGCACTGAGAAAACAGGAAGTTCAAGATTATCATGAGGGAAAGGAAGAACTTTATATCTGTCAAAGAATGGGGGTGAGGGCAGGGAAACTACTCATTGAAATGGATTGTGTAGAAAAAGGGATTGTAGAGCTCATCCACCAGTATGGCATACAGAGGCTTGTAATGGGAGCAGCATCTGATAAGTACCATGCTAGCCAGATAAACATAGTTAATGAGGAACTTCAACTTGCCTTAGATCAGAAATTATCTCTAGAGAATCGAATTGCATCCTCTGGACTTATTATAAAGGAGTTGGAGCAGAGGAATATATCTGCTGATGAGGTGTCTCAAAAGTACAAGGATGAACTACATGATTTGCAAATGCAACTTGAAAATGCACTATCCATGAGACACATTAAAAGGTTTTTCCAAATCCTTGGATATTTTGCAGGAATGATGCAAGATCCACAAGTGGCTGCAGATGGTTTTACTTATGAAGCTGATGCTATACGTGAATGGCTGAAAAGTGGCGTCACACTTCACCAAGGACAAACTCTCGAAGCTAGCACATCCCAACCACTCTCTTCACCATGTAATCCAGGACTGGCTTCAAAATCATTGATCTTACAAGCTTCTCATTTTTCTCTTTGA 930 0.4032 MMPATPPQINPTNKLRHIGVPGIITSRREIISEPSPSMVNDTICVVVAKNVKDSKLNLIWAIQNSGGSRICILDVHVPAPMTKFATWVCTCNLGAKFPESALRKQEVQDYHEGKEELYICQRMGVRAGKLLIEMDCVEKGIVELIHQYGIQRLVMGAASDKYHASQINIVNEELQLALDQKLSLENRIASSGLIIKELEQRNISADEVSQKYKDELHDLQMQLENALSMRHIKRFFQILGYFAGMMQDPQVAADGFTYEADAIREWLKSGVTLHQGQTLEASTSQPLSSPCNPGLASKSLILQASHFSL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00836 309 PANTHER OS02G0152300 PROTEIN 43 163 - -
Vian11g00836 309 Coils Coil 167 187 - -
Vian11g00836 309 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 290 IPR013083 -
Vian11g00836 309 Coils Coil 195 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00836 Vian-Chr11 9194213 9196239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00836 236 269 U-box Gene Family AT2G45910 64.706 2.32e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00836 - - pvu:PHAVU_010G0994001 249.21