Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00834 ATGGGGATGAAGAGCACTGGGGGAGAGATTGTTCAGGTCCAAGGAGGGCACATTGTTCGGTCCACAGGTAGAAAAGATAGGCACAGTAAGGTTTACACTGCAAAGGGTCCTCGTGATCGCAGGGTTAGGCTCTCAGCGCACACAGCAATTCAGTTCTACGATGTTCAGGATCGTTTAGGGTATGACAGACCGAGCAAGGCCGTGGACTGGCTCATAAAGAAGGCCAAGAATGCCATTGACAAGCTCGCTGAGCTTCCTCCGTGGCACCCTACTGCCAACGCTGCAGATGCAGAGAACAACCATACCAATGCAGGGTCTAGTGACATGGCCATTGCAGAACAATCAGAGTCTTCTGGTTACAATTTTCAGCTGCAACGGCAATTAGGTGAGGACCATGATAACCACCATTCGGTTTTCATCCCTGCACCTATTGACACTGATGCAATAGCCTTCTTTCCCACAACCACTGCCACCTCCTCCATCAATTTCCCAACCTACCCTCCTGACATAATCTCAAGAACCAACAACTCCACTGAGGATCTTGGCCTTTCTCTCCACTCCTTCCAAGACCCTGGCCTGATTCATGGCCAGTCCCAAGCAGATGCAAACCAAACACAAACACCTTCCAATCACCAAGCCCTCTTTTCTGGCTCAACTCAAGTGGGGTTTGAAGCCAATTACCCCAGGATTCTGACTTGGAACAATGATGCAGGCACGGATATGAACAGAACTGGGTTCATGGTCAACTCATCAGCGCTTCTAGGCCAAGGTGTTTCTGCTGCATATTCCCAAAGGGGGACCCTTCAGTCCAGTTTCTCACCATCACTTCGTCCTTGGAGTGACATTCCCATGGCTTCTTCCTCAGAACATCACAAGTCACAGCCAATTCAACAGGCTTCCATCTTTGGCAGCAGGTTTCTGTCTGATGCATTGCCAGGGTTCTGCATCCCAGCTAGAATTCAAGGCGAGGATGGGAGCCACGGTGTAGGTCCCGACAAGACATCATCTTCTTCTCCTAATTCTCATCATCGAACACAAACGTGA 1044 0.499 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLAELPPWHPTANAADAENNHTNAGSSDMAIAEQSESSGYNFQLQRQLGEDHDNHHSVFIPAPIDTDAIAFFPTTTATSSINFPTYPPDIISRTNNSTEDLGLSLHSFQDPGLIHGQSQADANQTQTPSNHQALFSGSTQVGFEANYPRILTWNNDAGTDMNRTGFMVNSSALLGQGVSAAYSQRGTLQSSFSPSLRPWSDIPMASSSEHHKSQPIQQASIFGSRFLSDALPGFCIPARIQGEDGSHGVGPDKTSSSSPNSHHRTQT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00834 347 Pfam TCP family transcription factor 23 125 IPR017887 -
Vian11g00834 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 283 IPR005333 GO:0003700
Vian11g00834 347 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Vian11g00834 347 MobiDBLite consensus disorder prediction 270 296 - -
Vian11g00834 347 MobiDBLite consensus disorder prediction 330 347 - -
Vian11g00834 347 MobiDBLite consensus disorder prediction 318 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00834 Vian-Chr11 9148305 9149348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00834 8 343 TCP Transcription Factor Family AT3G15030 42.680 4.28e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vian11g00834 TCP 3.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00834 - - pvu:PHAVU_005G097200g 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00834 11 9148305 9149348 Vian11g00834 11 9148305 9149348 ECH