Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00832 ATGGCGCAATTGCCTCCAAAGATCCCAAACCTGTCACCAGGTTGGCCGGACTTCTCTTCTCAACACCAGAAGATGCCATTGCCACCTCTTATCAACGACACCACCACCACCACCCATCAAAATCAAAACCCTTCTTGGGTGGACGAGTTCCTCGACTTCTCCTCCGCCCGCCGCGGCGCTCACAGGCGGTCGGTGAGCGACTCCATCACCTACTTGGACGCACCGATGAGGTGTGGTGAGAACAACAACCATAACAATAGTAATGGCAATGGCAATGAGTTTGACAGGTTTGATGATGAACAATTCATGTCCATGTTCACGGATGAAGTAGTGCTCTCTGGGGTCCCCTTGCCACCACCGACTACCTTGTCCTCCTCTAACCCTTCTAGCCCTTCCGATCAGAACTTCTTCCATGATGAGAAAGAGAGCAGCCGGAAGGAGAGGAAGCTGCAGAAGGAGGAAGAGGAGCACCACCACCAACTGAAAAATGAAGCAGCTGAGGTTGAAAGCCAATGCATGCAGGAAATTGCGCAGCCTCCAAATGACACCAATACTTCTTCTTCCAATGAGAGAATTAGTGACCCCAAGAGAGTCAAAAGAATCTTGGCTAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGAGAAGTGCAACTTCATTACAGGCTGAAGTTTCAGTGCTGTCTCCAAGGGTTGCATTTTTGGATCACCAACGTTTGCTTCTAAATGTGGACAATAGTGCTCTCAAGCAAAGGATCGCTGCCCTTGCTCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCACTGAAGAGGGAGATAGAAAGACTGAGGCAAGTTTATCAGCAGCAGAGGCTGAAGAAGATGGAAAATGCAGCAGAATCAGGTCCATTACCATTATGTGATGTTCAAAGAGAAAAGGAAGTACAACTTCTGAACGTTTGA 969 0.4788 MAQLPPKIPNLSPGWPDFSSQHQKMPLPPLINDTTTTTHQNQNPSWVDEFLDFSSARRGAHRRSVSDSITYLDAPMRCGENNNHNNSNGNGNEFDRFDDEQFMSMFTDEVVLSGVPLPPPTTLSSSNPSSPSDQNFFHDEKESSRKERKLQKEEEEHHHQLKNEAAEVESQCMQEIAQPPNDTNTSSSNERISDPKRVKRILANRQSAQRSRVRKLQYISELERSATSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYQQQRLKKMENAAESGPLPLCDVQREKEVQLLNV 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00832 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
Vian11g00832 322 FunFam Basic leucine zipper 61 195 268 - -
Vian11g00832 322 Gene3D - 195 300 - -
Vian11g00832 322 MobiDBLite consensus disorder prediction 14 43 - -
Vian11g00832 322 SMART brlzneu 192 256 IPR004827 GO:0003700|GO:0006355
Vian11g00832 322 MobiDBLite consensus disorder prediction 135 165 - -
Vian11g00832 322 SUPERFAMILY Leucine zipper domain 196 250 IPR046347 GO:0003700|GO:0006355
Vian11g00832 322 MobiDBLite consensus disorder prediction 113 171 - -
Vian11g00832 322 Coils Coil 151 178 - -
Vian11g00832 322 MobiDBLite consensus disorder prediction 75 96 - -
Vian11g00832 322 PANTHER BASIC LEUCINE ZIPPER 34 1 302 - -
Vian11g00832 322 CDD bZIP_plant_RF2 197 247 IPR044759 GO:0003700|GO:0006355
Vian11g00832 322 MobiDBLite consensus disorder prediction 1 43 - -
Vian11g00832 322 Pfam Basic region leucine zipper 193 241 IPR004827 GO:0003700|GO:0006355
Vian11g00832 322 Coils Coil 271 295 - -
Vian11g00832 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 246 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00832 Vian-Chr11 9097313 9099913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00832 1 273 bZIP Transcription Factor Family AT3G58120 56.478 2.72e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian11g00832 bZIP_2 8.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00832 - - gmx:100815433 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00832 11 9097313 9099913 Vian11g00832 11 9097313 9099913 ECH