Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00818 ATGGGTGTTGATTACTACGACATCCTTCAGGTCGATAGGGATGCTAAGGAAGAGGACCTGAGGAAAGCGTACAAGAGACTCGCCATGAAATGGCACCCCGACAAAAATCTCACGAAGAAGGAAGAGTCTGAAGCAATGTTTAAACAAGTATCTGAAGCGTATGAGGTTTTAAGTGATCCCCACAAAAGGGCACTTTTTGATAATACTCTAAAAGCTCGGGTGGAACCTGCTGCTGATGCTGGTGCATCTGGTGATGGTGGACCCACCCGATACCAGAACCCGTTCCCCAAAGCACCTCCAGTGGTGCGCAAGTTGCCTTGTACTCTGGAGGAATTGTACAAGGGAACCACCAAGGAGGTGAAAATAAGTCGAATAACCATAGACCCCTCAGGACAAATGAAACTGGATTGTGGATCTGGCGAATCCAAAACCCTTGATCTTGTTGCTGAAATTGCAGTTATGAACAGACAACGTAAGCTGGTGGAAGAGGTATTGATAGTGGAAGTGCAGCGTGGTTGGAAGAAGAACACCAAGCTCACGTATTTGGAGAAGGGAGGTGAAGTGGAATATCACAGACCAGCTGATCTTGTTTTGTTTATATATGAAAAACTGCACAGAGTTTACACCAGAGATGGAAACGACCTTGTGGTGACCCAGAAGATATCTCTTGTGGAAGCCTTGACAGGGTGCACTGTTAACCTGGTCACCCTTGATGGAAGAAACTTAACTGTGCCTATCGACCAAATTATTCATCCTGAATATGAGAAGGTTGTTGAAAGAGAAGGAATGCCTCTCCGAAGGGATCCAACAAAGAACGGAAACTTGAGGATAAAGTTCAAAATCACATTCCCAGACGACCTCACTCCTGACCAGAAGCTCGAAATGCAGAAGCTTTTGAGTGATTGA 906 0.4547 MGVDYYDILQVDRDAKEEDLRKAYKRLAMKWHPDKNLTKKEESEAMFKQVSEAYEVLSDPHKRALFDNTLKARVEPAADAGASGDGGPTRYQNPFPKAPPVVRKLPCTLEELYKGTTKEVKISRITIDPSGQMKLDCGSGESKTLDLVAEIAVMNRQRKLVEEVLIVEVQRGWKKNTKLTYLEKGGEVEYHRPADLVLFIYEKLHRVYTRDGNDLVVTQKISLVEALTGCTVNLVTLDGRNLTVPIDQIIHPEYEKVVEREGMPLRRDPTKNGNLRIKFKITFPDDLTPDQKLEMQKLLSD 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00818 301 Gene3D - 101 203 - -
Vian11g00818 301 SUPERFAMILY HSP40/DnaJ peptide-binding domain 208 292 IPR008971 GO:0006457|GO:0051082
Vian11g00818 301 CDD DnaJ 4 59 IPR001623 -
Vian11g00818 301 FunFam DnaJ subfamily B member 13 205 285 - -
Vian11g00818 301 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Vian11g00818 301 SMART dnaj_3 3 62 IPR001623 -
Vian11g00818 301 Pfam DnaJ C terminal domain 104 284 IPR002939 -
Vian11g00818 301 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Vian11g00818 301 PRINTS DnaJ domain signature 62 81 IPR001623 -
Vian11g00818 301 PRINTS DnaJ domain signature 42 62 IPR001623 -
Vian11g00818 301 PRINTS DnaJ domain signature 6 24 IPR001623 -
Vian11g00818 301 PRINTS DnaJ domain signature 24 39 IPR001623 -
Vian11g00818 301 SUPERFAMILY HSP40/DnaJ peptide-binding domain 100 205 IPR008971 GO:0006457|GO:0051082
Vian11g00818 301 Gene3D DnaJ domain 3 100 IPR036869 -
Vian11g00818 301 MobiDBLite consensus disorder prediction 77 97 - -
Vian11g00818 301 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 299 - -
Vian11g00818 301 SUPERFAMILY Chaperone J-domain 3 77 IPR036869 -
Vian11g00818 301 Pfam DnaJ domain 4 67 IPR001623 -
Vian11g00818 301 CDD DnaJ_C 99 287 - -
Vian11g00818 301 Gene3D - 205 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00818 Vian-Chr11 8934371 8936050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00818 5 68 C2H2 Transcription Factor Family AT1G74250 36.765 3.37e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00818 K09510 - sspl:121775163 309.686