Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00798 ATGAAGAACCTCTATTCCCAGCTCAACTCTCTTCTCCCATCTCATAATCCCAAGGAAGGCATACCAGTGCGTGCTCAAATAGGTGAAGCAATAAAGTACATTAAAAGCCTGGAGACAAAAGTGAAGATGTCGAAGGAGAAGAAGGAAAGGTTATTGGAAAAGAAGAGAACTCTCAGTGGCTGCAGCTCCAATGCTTCTGAAGCAAAAGGAAGCCAAAACCCACCAAAAATCGAGGTTCATGAAACTGGTTCTGCGATTCAAGTCATTCTGACATGTGGGGTCGATAAAAATTTCATTTTCTGTGAAATTCTTCGGATACTGTGCGAACTAAACGTGGAAGTTGTCAGTATCAATTCTACAATGGTGGGAGATTCAGTGATGCATGCTGTGCACTGTGAGGTTGGGCAATTTCAATTTGGTGCTGGCAAAGTGAGTGAAATGCTGAAATGGATTGTGAATGTATCCTTCGGTGATGATGAGAAAATAGATCCTGAATTGTCGGATTATGGAATTGGCACCACTGATAACACCTGGGTATTTGGCGTCTAG 549 0.4244 MKNLYSQLNSLLPSHNPKEGIPVRAQIGEAIKYIKSLETKVKMSKEKKERLLEKKRTLSGCSSNASEAKGSQNPPKIEVHETGSAIQVILTCGVDKNFIFCEILRILCELNVEVVSINSTMVGDSVMHAVHCEVGQFQFGAGKVSEMLKWIVNVSFGDDEKIDPELSDYGIGTTDNTWVFGV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00798 182 Gene3D - 1 66 IPR036638 GO:0046983
Vian11g00798 182 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 140 - -
Vian11g00798 182 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 62 IPR036638 GO:0046983
Vian11g00798 182 MobiDBLite consensus disorder prediction 57 71 - -
Vian11g00798 182 MobiDBLite consensus disorder prediction 57 76 - -
Vian11g00798 182 Coils Coil 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00798 Vian-Chr11 8656681 8658251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00798 1 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.888 4.84e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00798 - - var:108332856 345.125