Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00796 ATGAACTTCTTCATCAGTATTGATGAAGTTGGTGAAGCATTATCACGTGTAGATCAAATAGACGAGGCTATCAACCACATCAAGAACCTGGAGACAAAGGTGAAGATAGCGGAGAAGTACAGAGAAAGTTTAAGGGAAAGGAAGAGATCTCGTAGTGGATGTTCTAGTTCTTCTGAAGCAACGAAAGTTGAGGTTCATGAAATGGGTTCCTTGCTACGAATCACTCTGGTGTGTGGCTTCGAGGATCAGTTCATTTTAAGGGAAATTATTCGTATGCTTCATGAAGACAACATAGAAGTCAAGACAGTTCATTCCTCGCTCTCGTCTGCGACCTCGTCGCTACATGTTGTCAACGCTGAGATTCAGCAATCCTATAACTTAGGAACAGCCGTTTTCATTGAGAGACTGAAAATATTTGTGAACGGACATGGGTAG 435 0.4207 MNFFISIDEVGEALSRVDQIDEAINHIKNLETKVKIAEKYRESLRERKRSRSGCSSSSEATKVEVHEMGSLLRITLVCGFEDQFILREIIRMLHEDNIEVKTVHSSLSSATSSLHVVNAEIQQSYNLGTAVFIERLKIFVNGHG 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00796 144 Coils Coil 20 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00796 Vian-Chr11 8617399 8617977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00796 12 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 27.632 4.72e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00796 - - var:108332857 252.292