Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00794 ATGGCTCCACGAAGGTTGACCAGAGTTCCAATAACAGAATGTTTGGTCTTTGCTCTAAAATACATTCCAACCAAAAAAGAACGACATTGTTTAAGCACAAGTGACGAAGCTCGGACACGGAGGGTTCGGTTCGGTTCACTTCACAAAGCGACTTTGCCTTCCAGCCAAACCGTGGCGTTGAAGGGGGAGAGAGAGTTCCACAACGAGTTGACGCTGTGTTTGAATCTGAAGTTGTCGTTTGTTATTTCATTGCTCGGTTTTTCTTTGAACCGGCACGGTCGGAAGCTGGTTCTAGTTTACGAGCTGATGCCGAACCGGAGTTTGCAGGACGCGTTGTTGGATCAGCAGTGTCTGGAGCTGATGTGTTGCGGGAAGAGGTTTGACATTGTTGTTTCGGTGGTGATGGGGTTGGAGTATTTGCACCACACGTGTGAGCCTCTAGTGATTCATGGGGATATAAAGCCGAGTAATGTGTTACTGGATGGGGATTTTGGAGTGAAGATTAGGGATTTTGGGCTTGATAGGGTTAAGGCGATGGAGGATCTAGGAATGGTGGAGGAGAAGAAGGAAGGGGTTGTGGAAATTGCGGTCGAGGAGTTTGGGGTAATGGAGGAGGGGGAGAGTGTGAGTGTGGTGGATGTTGACCGGTCGTTGGAGAGTTGTCTTGTGAGGGTTGTCGATTACTCGGACGCGTCGTTGGTGGGGGTGATAAGTTGA 717 0.4923 MAPRRLTRVPITECLVFALKYIPTKKERHCLSTSDEARTRRVRFGSLHKATLPSSQTVALKGEREFHNELTLCLNLKLSFVISLLGFSLNRHGRKLVLVYELMPNRSLQDALLDQQCLELMCCGKRFDIVVSVVMGLEYLHHTCEPLVIHGDIKPSNVLLDGDFGVKIRDFGLDRVKAMEDLGMVEEKKEGVVEIAVEEFGVMEEGESVSVVDVDRSLESCLVRVVDYSDASLVGVIS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00794 238 Gene3D Transferase(Phosphotransferase) domain 1 19 203 - -
Vian11g00794 238 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Vian11g00794 238 Pfam Protein kinase domain 63 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00794 238 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00794 238 PANTHER OS07G0586332 PROTEIN 44 212 IPR044576 -
Vian11g00794 238 SMART serkin_6 44 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00794 238 SUPERFAMILY Protein kinase-like (PK-like) 43 180 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00794 Vian-Chr11 8578453 8598942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00794 8 180 Receptor kinase-like Gene Family AT3G45860 33.158 2.36e-24 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Vian11g00794 Pkinase 5.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00794 - - gmx:100814933 246.899