Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00791 ATGTCGGAGAGAAATGTTGATAAGGGAAAGAGGATCATCATTGGTGTTTCAACCTTGTTCTTGGTGGCTGTAGTTGGGGCTATCGTATTTGGTTTCAACCTCATTGAGAGTAGTTCAAATGGAAATGGTGATAAAGAGAATGTTAATAACAAAAATCAACATGTTGCTGCCTCTGTAAAAGCTGTCCAAACCCTTTGTCTTCCCACAAATTACAAGGAAGAATGTGAGAAAAATCTCATGACAGGTGTCGGAGACAGCACAACAACAGATCCATATGAACTTATCAAACTTGCTTTCAATATCACCATCGAAAAAATTACTGATAAATTCGAAGAAATGAATATCTTGCATGACATTGAGAAGGAGCCTAGAGCGAAGATGGCACTGGAAACATGCAAACAACTCATGGATCTCTCGGTTTCGGAGTTAGAAAGGTCATTTATTGGAATGAGCGAGTTTAACCTGATGAGTGTTGATAAAATCCTCATGAACTTAAAAGTTTGGCTAAGTGGTGCACTTACATACCAAGACACTTGCCTGGATGAGTTTGAGAACACCACCAGCGATGCTGGTAAAAAGATGCAGGATTTATTAACGACGGGCATGCATATGACTAGCAATGGTCTTTCCATCATAACAGCATTGTCTGATACTTTCACAGATTTTAATGCCACAAAATTACTGGGACGTCACAAATCCAAGCGTGTAAATTGGAATGGGATTTTGAACCTTAATTCAAAAGCTGCACGTTTGTTCTCACCTTCCAAGTTCTTTCATGGACTTGATTGGGTTCGGGCTACTGGAGTTCCTTGCTTCCCTAGCGTGCCCCCACACTACAGGCACAAGCAAACCATATTACCCTGGTGA 867 0.4072 MSERNVDKGKRIIIGVSTLFLVAVVGAIVFGFNLIESSSNGNGDKENVNNKNQHVAASVKAVQTLCLPTNYKEECEKNLMTGVGDSTTTDPYELIKLAFNITIEKITDKFEEMNILHDIEKEPRAKMALETCKQLMDLSVSELERSFIGMSEFNLMSVDKILMNLKVWLSGALTYQDTCLDEFENTTSDAGKKMQDLLTTGMHMTSNGLSIITALSDTFTDFNATKLLGRHKSKRVNWNGILNLNSKAARLFSPSKFFHGLDWVRATGVPCFPSVPPHYRHKQTILPW 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00791 288 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 217 IPR035513 -
Vian11g00791 288 NCBIfam pectinesterase inhibitor domain 55 215 IPR006501 GO:0004857
Vian11g00791 288 Pfam Plant invertase/pectin methylesterase inhibitor 61 211 IPR006501 GO:0004857
Vian11g00791 288 CDD PMEI-like_3 64 216 - -
Vian11g00791 288 SMART PMEI_2 57 211 IPR006501 GO:0004857
Vian11g00791 288 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 216 IPR035513 -
Vian11g00791 288 PANTHER PECTINESTERASE 16 215 - -
Vian11g00791 288 FunFam Pectinesterase 58 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00791 Vian-Chr11 8552814 8554647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00791 8 249 Carbohydrate Esterase AT3G05610 35.223 1.58e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00791 K01051 - gmx:100820556 301.597