Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00788 ATGGCGTCTTTACCGTCGGGTCTCGCCAACGGTGCTTCCAACGGTTTTCATTTTACTTCTGGTGACATCCTTTGTTCCTACGAGGACAACAATACCAACGACTGCTCTTCTAACGGCATTTACATCGATCCCGCCAAGGATTTTCATGCATCAAGGATGGCAAAAACATCCATAGTTCCTGCTACTGCCTATAGTTCGTCTGAAGATTCTTTGAGCCAGGATGTGATTGCCTCTGTTGAGAAGACTATGAGAACATGTACCGATAACCTTCTGCGGTTTCTTGAGGGAATCAGTTCAAGGCTGTCAAACTTGGAATTATATTGTTACAATCTTGACAAATCAATTGGAGCAATGCGATCTGATTTAAATAGTGATCGTGAAGAGGCAGATTCAAAACTCAAATCTCTTGATAAACACCTTCAGGAAGTACACAGGTCTGTGCAAATTTTGAGAGACAAGCAAGAGCTGGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAGCTTATTCGTAAAGAATCATCTTCCTCAAGTCATACACAGTCTAATGAGGAGAGATCTTCACCTTCTTCCATTGATCCAAGAAGAATTGATAATGCATCTGACACACAGAACCTAGAGTTAGCTCTTGTCTTACCTCATCAAGTTGCCCTCCGGCAACAGCCCGTGTCATCTTCCCATCAAGTGCCAGCTCCAAATGTCGGCCAAGCCACTCAACAACCTCATCATTACCTGATGCCGCCTACCCCTTCCAATCCACATGCTTGGAATCAATATTTGCCGTCTGATTCACACTATCGAATTCCACCATCAACATCATCGTCTCTGGTAACACAATCCCCACCCAGTCAACAATTATCTCAGTATCAGCAGCTACAGCACCAAGAATTGCAATGGCCTCAACAGCTACCACAGCAGGTGGATGTGCTAACTCCACATCCACCCTCAATCCAGTCTCAAGTAAGACCCCCTTTAACCAATGTTTATACTCCTTATTCTACAAGCCAAGCTACAAATCATCTTCCGCCACGGAACAGCATGCCGATGCAACTCTCTTATTCAGGGATTCCAATTCAAGTACCCAGCCATGGTGATGTTCAACCACATGGATACAGTGGAGCTGGTGGAACAGTTCCCCCCCAACAACCTATGCTCCAGCACATGAAGGGCTCTTTTTCAGCACAGCCAGGGGATGTGTATGGAACTAGCGGGATCTACACCACTCATCCTCCTGCTAGTTCCTTCACGGTGTATGATAGTGAGAATGCAAGATCACATTATCCGTCACAACCTTCTCATACTGCTCAAGGTGGATATCCTCCAACTAGTGCTTCCCTTCACAACGCTGCACCACAGAATTTTATGGTTGAGAGCTCTAGCCAGTCACAATTTCTTCGAATCAATCCCAACAATGATCACGTGATAAGCACGATCCAGAGGGGATGGTTAGGGTGA 1452 0.4545 MASLPSGLANGASNGFHFTSGDILCSYEDNNTNDCSSNGIYIDPAKDFHASRMAKTSIVPATAYSSSEDSLSQDVIASVEKTMRTCTDNLLRFLEGISSRLSNLELYCYNLDKSIGAMRSDLNSDREEADSKLKSLDKHLQEVHRSVQILRDKQELAETQKELAKLQLIRKESSSSSHTQSNEERSSPSSIDPRRIDNASDTQNLELALVLPHQVALRQQPVSSSHQVPAPNVGQATQQPHHYLMPPTPSNPHAWNQYLPSDSHYRIPPSTSSSLVTQSPPSQQLSQYQQLQHQELQWPQQLPQQVDVLTPHPPSIQSQVRPPLTNVYTPYSTSQATNHLPPRNSMPMQLSYSGIPIQVPSHGDVQPHGYSGAGGTVPPQQPMLQHMKGSFSAQPGDVYGTSGIYTTHPPASSFTVYDSENARSHYPSQPSHTAQGGYPPTSASLHNAAPQNFMVESSSQSQFLRINPNNDHVISTIQRGWLG 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00788 483 MobiDBLite consensus disorder prediction 218 292 - -
Vian11g00788 483 MobiDBLite consensus disorder prediction 169 197 - -
Vian11g00788 483 Coils Coil 149 169 - -
Vian11g00788 483 MobiDBLite consensus disorder prediction 361 392 - -
Vian11g00788 483 MobiDBLite consensus disorder prediction 421 446 - -
Vian11g00788 483 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 10 479 - -
Vian11g00788 483 MobiDBLite consensus disorder prediction 307 346 - -
Vian11g00788 483 MobiDBLite consensus disorder prediction 168 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00788 Vian-Chr11 8505932 8508972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00788 75 243 Trihelix Transcription Factor Family AT5G14540 29.586 1.84e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00788 - - vum:124844872 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00788 11 8505932 8508972 Vian11g00788 11 8505932 8508972 ECH