Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00776 ATGGCTGCAACGAACGGTGGGAAATTCGATGTGGGAGATGAAACTCACAATTTTTCCCAGAAGGGAAGTGAAAGCGTTGATTGGGAGATTGAAAAGGGAAACAGCGTGGGTTCAAGCTCTCAGAGGCGTCAATGGAAGCCAGTTTTTGATGATACTTCCATTTCACACGATAGACCTCTGAAGAAAATCCGCAGCCCCGATCGCCGTAACACAAACCAATCTTCCTCCTCTTCTTCTTCTTCTGTTACTTTTCAACCTTCTCCTCTCTCTATCCCTCCTTCATCCTCTTCAAGAATCGTGTTCCCTTTCGCCTTCAACGGTTCCCAATACCCAATGCAATTCCCGCACCAATTCGGAGCCATAAATTCACCCTTCCCTCACTCCTCTTTCCAAAACCCCCAACAGATGATATCATTCGGGTCCCAGCAACAAAACCTTCCCTTTCCACCAAACATGGCCCGAGATTCTTCTCTTCCACACCACCATCATCATCAACAGCATCCGCAGCAACTTCTTCAGCATTGGAGAGACGCTCTGAATCTAAGTCCCAGAGGAATGTTTACCCACTTGGGGCCAGATGGAAGGCCATTGTTTAGGCCTCCAACGCAGCCCATAAACACCACCAAGCTCTACAGAGGAGTGAGGCAACGCCATTGGGGAAAATGGGTCGCTGAAATTCGTCTTCCTCGAAACAGAACGCGTCTCTGGTTGGGCACATTTGACACGGCGGAGGACGCCGCCATGGCCTACGACCGCGAAGCCTTCAAACTCCGAGGAGAAAATGCCAGACTCAATTTCCCCGAAATGTTCCTCAACAAAGACAAAAACGAACAAGTTGAAGAAGAACCTTCTTCACCTGTTCAAGACCAGCATGAACAAAAACCTGTTCCTGTAGGCCGTGACATGCCAAGAGAAGAGTCTAACGAGAATGACTCAGGAATTGGATCGAGCGACGCTACTGTGAGTGATGAGGTTCATGCTGCTGCTGCTTCTGCAGAAGGAGGTGACGGGGTTTCTCAGGAACTTGTTTGGGGAGAAATGTCTGCATGGTTCAATGCTATTCCTGCAGCTTGGGGACCTGGTAGCCCTATGTGGGATGATTTGGATCCCACCAATAATCTTCTTTACCAATCACACGTTCCTTTTTCAAATTCCAATCAGCAAGAGATGAATGATGCCTCTGATGATGCTCAGAGACATGAACACAACACGGGATCAGGTTACTTATGGAAGGATCAGGATTGA 1245 0.4827 MAATNGGKFDVGDETHNFSQKGSESVDWEIEKGNSVGSSSQRRQWKPVFDDTSISHDRPLKKIRSPDRRNTNQSSSSSSSSVTFQPSPLSIPPSSSSRIVFPFAFNGSQYPMQFPHQFGAINSPFPHSSFQNPQQMISFGSQQQNLPFPPNMARDSSLPHHHHHQQHPQQLLQHWRDALNLSPRGMFTHLGPDGRPLFRPPTQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPEMFLNKDKNEQVEEEPSSPVQDQHEQKPVPVGRDMPREESNENDSGIGSSDATVSDEVHAAAASAEGGDGVSQELVWGEMSAWFNAIPAAWGPGSPMWDDLDPTNNLLYQSHVPFSNSNQQEMNDASDDAQRHEHNTGSGYLWKDQD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00776 414 MobiDBLite consensus disorder prediction 276 308 - -
Vian11g00776 414 Gene3D AP2/ERF domain 210 269 IPR036955 GO:0003700|GO:0006355
Vian11g00776 414 FunFam Ethylene-responsive transcription factor 2 209 268 - -
Vian11g00776 414 MobiDBLite consensus disorder prediction 49 68 - -
Vian11g00776 414 MobiDBLite consensus disorder prediction 377 414 - -
Vian11g00776 414 CDD AP2 209 268 IPR001471 GO:0003700|GO:0006355
Vian11g00776 414 SMART rav1_2 210 273 IPR001471 GO:0003700|GO:0006355
Vian11g00776 414 MobiDBLite consensus disorder prediction 377 392 - -
Vian11g00776 414 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 27 368 - -
Vian11g00776 414 Pfam AP2 domain 211 259 IPR001471 GO:0003700|GO:0006355
Vian11g00776 414 SUPERFAMILY DNA-binding domain 210 268 IPR016177 GO:0003677
Vian11g00776 414 ProSiteProfiles AP2/ERF domain profile. 210 267 IPR001471 GO:0003700|GO:0006355
Vian11g00776 414 MobiDBLite consensus disorder prediction 69 94 - -
Vian11g00776 414 MobiDBLite consensus disorder prediction 393 407 - -
Vian11g00776 414 MobiDBLite consensus disorder prediction 32 48 - -
Vian11g00776 414 MobiDBLite consensus disorder prediction 276 320 - -
Vian11g00776 414 PRINTS Ethylene responsive element binding protein signature 211 222 IPR001471 GO:0003700|GO:0006355
Vian11g00776 414 PRINTS Ethylene responsive element binding protein signature 233 249 IPR001471 GO:0003700|GO:0006355
Vian11g00776 414 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00776 Vian-Chr11 8377870 8379114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00776 51 384 AP2-EREBP Transcription Factor Family AT2G20880 43.931 3.20e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Vian11g00776 AP2 2.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00776 - - var:108333403 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00776 11 8377870 8379114 Vian11g00776 11 8377870 8379114 ECH