Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00769 ATGGGTTGCTGTGTCTCAACAAGTAGTCAGAGTGCTCGTAGCAGCAGGAGCACTGGAGACACAAACGTTCAGACGTGTCTAGAAATAGGATTCTGTGGTCAAAAGAGTGCAAGGAGAACATTCTCTGACCATGTTATCTCTCTGCACCAGTTACCATCTTTACCCAACAGAATTTTCACCAATGGAAAGAGCAGGTCTTCTTGCATATTTACACAGCAGGGTCGTAAGGGGATTAATCAGGACGCCATGATTGTATGGGAAGATTTCATTTCAGAAGATGTGACCTTTTGTGGTGTCTTTGATGGCCACGGTCCACACGGTCACCTTGTTGCACGCAAAGTCCGGGAAGCCTTGCCACTCAAATTGCTTTCATTTTTGCATTCCTCGGAATCAGGACAAAATGATTCAGGTAAAACTTGTTTCAGAGGCAGCACGAAGCCTGAAAGTGGAGAGTCTGAGAAAGATGTTGCTGCTGAAGATAAACTGAATTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGATAAAGAGCTGAGGTCTCATCCAAATTTGGACTGCTTCTGTAGTGGGAGCACAGCTGTCACTGTAGTGAAACAGGGTTCAAATTTGTTCATGGGCAATATTGGGGATTCCCGAGCAATCATGGGATCCAAGGACATCAATGATGTCATGGTGGCAATTCAGTTGACCGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATCAAACGATGCAAGGGTAGGGTATTTGCATTACAAGATGAGCCAGAAGTTCATAGGGTATGGTTACCTTTTGATGATGCACCAGGATTAGCAATGGCTCGAGCATTTGGAGATTTTTGCTTGAAGGAATACGGTGTGATTTCTATACCTGAATTTTCTTATCGGTTACTAACAGACAAAGATCAGTTCATTGTTCTTGCCTCAGATGGGATCTGGGATGTTTTGAGCAACGAAGAGGTAGTTGAGATTGTATCTTCAGCACCAAGTCGATCATCAGCAGCAAGAATTCTGGTGGATTCGGCGGCTCGAGAGTGGAAACTTAAGTATCCTACTTCAAAAGTGGATGACTGTGCTGTTGTGTGCCTGTTTCTGGATGGAAAAATGGATTCAGAATCTGACTGTGAGGAGCAATGCTTCTCTTCTGCTATCATGCAGAGCAACCATTCAGGCAATCTGGTTGAGACAGATGATGGACAAAAGTATGAGCCAACTTTGCAAAGGAACTTTACAGTGAGATCCTCAGAAGAAAATGGGAGGTATGGAGGAAGAGGAGGAGTATCTGTTGATGTTGTTGAAGATGGAAACTCACTGGTTCCATCAGGGCCTGAAGATCAAAACTGGTTAGGTTTGGAGGGTGTGACCCGAGTAAACTCACTGGTTCAACTTCCTAGATTTTCTGAGGAAAAGCCAAACTGTTGA 1437 0.4405 MGCCVSTSSQSARSSRSTGDTNVQTCLEIGFCGQKSARRTFSDHVISLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFISEDVTFCGVFDGHGPHGHLVARKVREALPLKLLSFLHSSESGQNDSGKTCFRGSTKPESGESEKDVAAEDKLNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTVVKQGSNLFMGNIGDSRAIMGSKDINDVMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSYRLLTDKDQFIVLASDGIWDVLSNEEVVEIVSSAPSRSSAARILVDSAAREWKLKYPTSKVDDCAVVCLFLDGKMDSESDCEEQCFSSAIMQSNHSGNLVETDDGQKYEPTLQRNFTVRSSEENGRYGGRGGVSVDVVEDGNSLVPSGPEDQNWLGLEGVTRVNSLVQLPRFSEEKPNC 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00769 478 CDD PP2Cc 65 370 IPR001932 -
Vian11g00769 478 Gene3D - 57 378 IPR036457 -
Vian11g00769 478 FunFam probable protein phosphatase 2C 52 57 373 - -
Vian11g00769 478 SMART PP2C_4 55 368 IPR001932 -
Vian11g00769 478 MobiDBLite consensus disorder prediction 1 20 - -
Vian11g00769 478 Pfam Protein phosphatase 2C 92 347 IPR001932 -
Vian11g00769 478 MobiDBLite consensus disorder prediction 130 146 - -
Vian11g00769 478 MobiDBLite consensus disorder prediction 130 157 - -
Vian11g00769 478 SUPERFAMILY PP2C-like 59 372 IPR036457 -
Vian11g00769 478 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Vian11g00769 478 PANTHER PROTEIN PHOSPHATASE 49 368 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00769 Vian-Chr11 8272225 8274612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00769 1 476 PP2C-type Phosphatase Gene Family AT1G03590 68.750 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00769 - - gmx:100777448 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00769 11 8272225 8274612 Vian11g00769 11 8272225 8274612 ECH
Vian11g00769 11 8272225 8274612 Vian5g00821 5 28335578 28338062 PCT