Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00744 ATGGCTGACCTGAGAGAACTTGATACAGTGAAGATAATAGAGCAGTGTGAAGTTTCTCCGCCACCAAATTCTCTTCCTTCAACCATTCTTCCCCTAACTTTCTTTGATATTCCATGGTTCTTCTGCAACTCTATCCAACGTATCTTCTTCTATGAGTTTCCCCATCCCACGCACCACTTCCTACAAACAACACTTCCTATTCTCAAACACTCTCTTTCGCTCTCTCTCCAACACTTCTTCCCTTTTGCCTCCAATCTCATTGTTCCACCACAACTCCACCTTTCTCACATCCGTTACCTTCAAGGCGACTCTCTCTCCTTAACCGTTGCAGAGTCCACCGCAGACTTCACTCTCCTCACATCTGATTCTCCTCAAGACGTTCGAAACTGGCACCCTCTTGTTCCCACCTTGCCTTCCCCACGTGTAGAGCAGGATGGCATACGTGTGCTGCCTCTCATGGCCATTCAAGTCACGCTTTTTCCAAACTCTGGCTTCAGCATATGCCTTACCTTCAACCACCTTGCTGGGGATGGCAAATCACTTCATCATTTCATCAAGTTTTGGGCTTCTCTTTGCAAGGCAAGAGGGGATTTGACTTCCATTGAGACCTCTTTATCTCTTCCTTCACACCAGAGAGACAAAGTTAAAGACCCAAAGGGGCTTTTGTTCATTTATTTTCGAGTTCTTGAACATTTTGAGTCCAAAAGAATGGAGTTCGCAGGTCTCGTGCGAGATGTTTCCACTAACAGGGTTCGCTTCACTGTTCTACTCAGTCTTGAACAAGTTCGGAAACTAAAGAAATGGGTCTCTCTTAAATGTGCCAGTGACGATTCGGGGTTATTACACATATCAACCTTTGTCGTTGCATGCTCTTTGATTTGGGTTTGCAAGATTAGGTCGGAAGAAAAAAAAGCGAATTTTTCAGAAGAGTGTGATGAACTTTGCCACTTGGTGTTTCTAGCAGATTGCCGTGAGCGTCCTGAATTTTCATTACCTTCAACGTATTTTGGAAATTGTTTAACCTCTTACATTGTGACAATAAAGAGGAGTGAGCTAGTGGGAGAAGATGGGATCGTTGCTGCAGCGAATGCTATTGGAAAGGAAATTAGAGATTTGAAGAGTGATCCTTTGAAAAATGCTGAAACGTTGATGTCAAATTATAGAGAGTTAGGGAAACCAGGTAAATCTGTGTTGGTTATTGCAGGTTCACCAAAATTGGGTGTGTACAAGACTGATTTTGGTTGGGGAAAGCCTAAGAAATGTGAAGCAGCTCATATTGAATCGTCGGGATCCATTTCTCTCTCTGATTGCAGAGACGAAAACGGAGGAATTGAGGTTGGATTGGCACTTGAAAGAACTCAGATGAATAAGTTCACGGACATCTTAGAAAAGGAAATCCATAACATTGATAGATCAGATTGA 1422 0.4311 MADLRELDTVKIIEQCEVSPPPNSLPSTILPLTFFDIPWFFCNSIQRIFFYEFPHPTHHFLQTTLPILKHSLSLSLQHFFPFASNLIVPPQLHLSHIRYLQGDSLSLTVAESTADFTLLTSDSPQDVRNWHPLVPTLPSPRVEQDGIRVLPLMAIQVTLFPNSGFSICLTFNHLAGDGKSLHHFIKFWASLCKARGDLTSIETSLSLPSHQRDKVKDPKGLLFIYFRVLEHFESKRMEFAGLVRDVSTNRVRFTVLLSLEQVRKLKKWVSLKCASDDSGLLHISTFVVACSLIWVCKIRSEEKKANFSEECDELCHLVFLADCRERPEFSLPSTYFGNCLTSYIVTIKRSELVGEDGIVAAANAIGKEIRDLKSDPLKNAETLMSNYRELGKPGKSVLVIAGSPKLGVYKTDFGWGKPKKCEAAHIESSGSISLSDCRDENGGIEVGLALERTQMNKFTDILEKEIHNIDRSD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00744 473 Gene3D - 247 468 IPR023213 -
Vian11g00744 473 PANTHER - 10 467 - -
Vian11g00744 473 Gene3D - 5 236 IPR023213 -
Vian11g00744 473 Pfam Transferase family 21 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00744 Vian-Chr11 8001645 8003066 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00744 37 462 Monolignol Biosynthesis Gene Families AT5G48930 25.223 2.60e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00744 - - vra:106771201 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00744 11 8001645 8003066 Vian11g00744 11 8001645 8003066 ECH