Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00743 ATGATGGGGTACCTTGCACCTGAACTCATACGAACGGGGAAACCCACCACCAGTTCTGATGTTTACGCTTTCGGAGTGTTATTGGAGGTGGTGTGCGGGAGGAGGCCCATTGAGGTGAAGGCATTGCCGGAGGAGCTGGTGCTGGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCGGTGGTGGACCCCAGGTTGGGTGGGGCGTTTGATGAGGTGGAAGTTTTGGTAGTGATTAAAGTGGGGTTGTACTGTTCCGCGGAGACACCAGAGAAGAGGCCCAGCATGAGGCAGGTGGTGAGGTATTTGGAGAGGGAGGTGTAA 333 0.5826 MMGYLAPELIRTGKPTTSSDVYAFGVLLEVVCGRRPIEVKALPEELVLVDWVWERWRMGAPLAVVDPRLGGAFDEVEVLVVIKVGLYCSAETPEKRPSMRQVVRYLEREV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00743 110 Pfam Protein tyrosine and serine/threonine kinase 4 106 IPR001245 GO:0004672|GO:0006468
Vian11g00743 110 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Vian11g00743 110 SUPERFAMILY Protein kinase-like (PK-like) 3 106 IPR011009 -
Vian11g00743 110 PANTHER - 2 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00743 Vian-Chr11 7999078 7999410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00743 3 109 Receptor kinase-like Gene Family AT3G55550 69.444 4.63e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vian11g00743 PK_Tyr_Ser-Thr 4.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00743 - - vum:124822188 212.616