Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00741 ATGGCAGAAGTTAGAACACATAAACTTGTTGAGAAATCTCATGTTGCTCGAGCATCACTTCCTAGTTCTACAACAAGAACAACCTCGTCTCTTCCCCTCTCATTCCTTGACTTGCCTTTAGCTGGTCCTGTTTATGTCAAACGCCAATTCTTCTATCAGTTTCCCCACTCCACACACCATTTTTGTGAAACTACACTCCCCACTCTCAAGCACTCTCTCTCTCTTATCCTTCAACACTTCTTTCCTCTAGCTGGAAATCTCCTTTCTCCTCCACCACCCCACAAACCTTTCATTCGCTGCACTGATGATGACACTGTCCCTTTAACCATCATTGAATCCAAAGCTGATTTCAACCATCTCTCATCCAACCATCCTAAGAGTATCCATGAATTGGGTCACCTGAATCCCGAGTTGACATTCGCAACCATGCATGATGACACGTTCATTTTCCCACTAGTGGCATTACAAGCCACGGTGTTCGAAAGCCATGGCCTTTGCATCGCCATCACGTACTGTCATGTGATGGATGGTAAGTGTTGCAATCATTTCATGAAGTCTTGGTCTTCCCTTTGTCAAAGTGGTGGAGTTGACTTGACACTTGTAGAGAATTCACCACCGTGCTTCGATAGGGAAGTGTTGAGGGACCCCAGAGGAGGACTCGAGGACATTTTTTTGACAGACTATTTCCTAGAGAGATCAACTTGGAAGGACAAGCTCATTGAACAAACTCCTAAACACGAGGAGTATTTTAAGGCGACGATTGTCTTTGGGAGAGATGACATTGAGGGCTTAAAAAGATGGGTTCTGGAACAGTGGAAGAAAAATGACGAGTTTAACTGCCCGCAATATTTGTCAAAATTTGTGGTTGTTTGTGCTCTTGTGTGGACTAGCTTGGTTAAAACAAGATACAAAGATCATGATGATGAAGATGTTAAAGAAGAATACTTTCGTTTCGCTGTAGATTGCAGAGGTCGCCTTGGTCATCCTGTGCCAGAAACATACTTTGGAAACTGCTTAGCGCTGTGTTATGCCATGCTTAAGAGAAATGAGCTTAAGGGAGAGGATGGTTTTGTGAATGCGGTGAAGGTAATTGAAAAGACAGCGAGTGATATGAAAAGTGAGCCTTTTAAAGAAGCAGAAGATTGGAGGGCTTTGTCTGTGAAAACGTTTGTGTTGGGAACTCCGTTGCTAGTTACTGGGTCACCTAACTTCGACGTTTACGAGACTGATTTTGGATTCGGAAGGCCAACCAAAGTTGAAATGGTACATTCCTTCAAGTGCATGTCTCTAGCCGAAAGTAGAGATGAGGAAGGAGGACTTGAGGTTGGTCTGGTGTGTAAGAGTGAGGAGTTTGAATATTTATTTTATGTCCTTCAACAAGGACTACAAACTACAAAATCCTCAGTGTGTTAA 1413 0.4317 MAEVRTHKLVEKSHVARASLPSSTTRTTSSLPLSFLDLPLAGPVYVKRQFFYQFPHSTHHFCETTLPTLKHSLSLILQHFFPLAGNLLSPPPPHKPFIRCTDDDTVPLTIIESKADFNHLSSNHPKSIHELGHLNPELTFATMHDDTFIFPLVALQATVFESHGLCIAITYCHVMDGKCCNHFMKSWSSLCQSGGVDLTLVENSPPCFDREVLRDPRGGLEDIFLTDYFLERSTWKDKLIEQTPKHEEYFKATIVFGRDDIEGLKRWVLEQWKKNDEFNCPQYLSKFVVVCALVWTSLVKTRYKDHDDEDVKEEYFRFAVDCRGRLGHPVPETYFGNCLALCYAMLKRNELKGEDGFVNAVKVIEKTASDMKSEPFKEAEDWRALSVKTFVLGTPLLVTGSPNFDVYETDFGFGRPTKVEMVHSFKCMSLAESRDEEGGLEVGLVCKSEEFEYLFYVLQQGLQTTKSSVC 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00741 470 Gene3D - 247 464 IPR023213 -
Vian11g00741 470 PANTHER - 8 463 - -
Vian11g00741 470 Gene3D - 7 237 IPR023213 -
Vian11g00741 470 Pfam Transferase family 21 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00741 Vian-Chr11 7984067 7985479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00741 22 452 Monolignol Biosynthesis Gene Families AT5G48930 23.516 1.86e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00741 - - var:108332870 963.37