Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00740 ATGAGATCAACTTCTTCTGTTCCTCTGTCGTTCCTTGATTTGCCTTTAGCAGGTCCTATTTATGTCAGACGCCAATTCTTCTACCACTTCCCCCATTCCACACTCCATTTTTCTGAAACTACCATTCCTTCTCTCAAAACCTCTCTCTCTCAAACCCTTCAACTCTTCTTTCCTCTTGCCGGAAACCTCCTGTGTCCTCCACCACCCCATAAACCCTTCATTCGTTGCACCCATGATGACTCTGTCCCCTTCACTATCATCGAGTCCAAAGCTGATTTCGACTACCTCTCATCAAACCACCCCAAAAGTCTCAAAGACTTGGAACACTTGGTTCCCAAGTTAGCATGCACGAACACACACGATGACACGTTTGTGTTCCCTTTGCTGGCATTGCAAGCCACGGTTTTCCCCAACCGGGGCCTCTGCATCTCGATCACCTATTGCCACGTGATGGATGATAGTTGTTGCAGCAATTTCATGAAGTCTTGGGCTTCCTTTTGTCGAAGTGGTGGCGTTGACTTGACTCTTGAAGGAAAGTCAGCTCCGTGCATGGACAGGGGAGTGTTGAAGGACCCCAAAGGGTTGGAAGCTATCTTCTTAAGAGATTATTTTGAAGAGAGGTCAACTTGGAAGGAAAAGCTCGCTGGGAAAACCTCGGAGGTTTGCAATGCTGAAGATTATGTCAAAGCCACGATTGTTTTTGGAAGGGATGATATCGAGAGGCTGAGAAGATCGGTGTTGAAGCAATGGAAGAGAAGTGAAGAATTCAGCACGTCACAACATGTATCGAAATTTGTGGTGACTTGTGGCTTTGTGTGGGCTTGTTTGGTTAAAACAAGACACAGAAGCGAATATGAAGAAGATAAAGAAGAGTACTTTCGTTTCGCTGCAGATTGCAGAGATTGGCTTGAGCCTGCTGTGCCAGAAACATACTTTGGAAACTGCTTAACGTTATGTTTTGCAATGCTGAAGAGAAAGGAGCTGAAGGGAGAAGGTGGTTTTGTGAATGCGGTGCAGGTTATGAGAAGGGCAGTGAGTGATATGAAAAGTGATCTGTTTAAGGATGCAGAAAACTGGAGGGAAACATTTACGAGGATGTTTGCTTTGGGAAGTACTTTGATAGTTACAGGGTCACCCAAGTTCACTGTTTATGAGACTGATTTTGGATTTGGAAAGCCTAAGAAAGTGGAAATGGTACATTCCATGAAGGGTATGTCTCTAGCAGAGAGTGGAGAAAAGGAAGGAGGACTTGAAGTTGGCTTGGTGTGTACAAACACACAATTTGAATATTTAGTTTCTGTCATTAAACAAGAACTTCAACTTTCAAAATCCTGA 1335 0.4419 MRSTSSVPLSFLDLPLAGPIYVRRQFFYHFPHSTLHFSETTIPSLKTSLSQTLQLFFPLAGNLLCPPPPHKPFIRCTHDDSVPFTIIESKADFDYLSSNHPKSLKDLEHLVPKLACTNTHDDTFVFPLLALQATVFPNRGLCISITYCHVMDDSCCSNFMKSWASFCRSGGVDLTLEGKSAPCMDRGVLKDPKGLEAIFLRDYFEERSTWKEKLAGKTSEVCNAEDYVKATIVFGRDDIERLRRSVLKQWKRSEEFSTSQHVSKFVVTCGFVWACLVKTRHRSEYEEDKEEYFRFAADCRDWLEPAVPETYFGNCLTLCFAMLKRKELKGEGGFVNAVQVMRRAVSDMKSDLFKDAENWRETFTRMFALGSTLIVTGSPKFTVYETDFGFGKPKKVEMVHSMKGMSLAESGEKEGGLEVGLVCTNTQFEYLVSVIKQELQLSKS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00740 444 Gene3D - 224 442 IPR023213 -
Vian11g00740 444 PANTHER - 5 439 - -
Vian11g00740 444 Gene3D - 2 215 IPR023213 -
Vian11g00740 444 Pfam Transferase family 6 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00740 Vian-Chr11 7969331 7970665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00740 1 393 Monolignol Biosynthesis Gene Families AT5G48930 22.384 7.43e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00740 - - pvu:PHAVU_005G109000g 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00740 11 7969331 7970665 Vian11g00740 11 7969331 7970665 ECH