Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian11g00733 | ATGGATTTTAACCTCGAAAACCCTCTTGGAAACTTCCACGACCTTCCCTCTGAAGCTCTTCCTTCGCTCTTCTTCATCGAATCCGACCACATCCCTCCACTCAATTACTGTCAAACTCTCAAAGCCAGCGACTTCGACATCTCTGTTAGGAGAAATGTTGTCTCTTTGATTTCACAGCTCTCCTGCACTTTCGATCCAGTTCTTCCTTACCTTGCTATCAACTACTTAGATCGCTTCCTCGCTAACCAAGGAATATTGCAACCAAAGCCATGGGCAAACAAGCTTCTTGCAATAGCTTGCTTTTCTTTAGCGGCCAAGATGTTGAAAGCAGAGTACTCTGCCACTGATGTCCAGGTTCTTCTGAATCATGGTGATGGAGGTGTCATTTTTGAGACACAAACAGTTCAAAGAATGGAGGGAATTGTCTTGGGGGCTCTCCAGTGGCGAATGCGTTCGATCACCCCCTTCTCTTTCATTCCCTTCTTCGTGAATTTGTTCAGGCTCAAAGACCCGGCATTTAGACAGGTTCTGAAGGATCGAGCATCTGAAATCATACTGAAGTCACAAAGAGAGATAAAGGTCTTGGAATTCAAGCCATCTGTAGTTGCTGCGTCAGCCCTTCTGTATGCTTCACATGAGTTGTTTCCCTTTCAATATCCATGCTTCTTAGGAGCAATATCCGACTGTTCATATGTTAACAAAGAAACTGTGGTGCAATGTTATAATGTGATACAGGACATAGCCAATGAGGAGTACGAATCTGTGTTGAATATAAATTCAACTTCAGACACCCCGGTTAATGTGTTAGACGAACATTTTCTAAGCTTGGAAAGTGAAAAAACCAACGGCGTGATACAAGAGCAGGAGTTCAAAAGAAGGAAAATTGCCGATTATGGCAACAAACCCACTGTCCCGTTTTCTCATTTTCATCAATGCTGA | 939 | 0.4334 | MDFNLENPLGNFHDLPSEALPSLFFIESDHIPPLNYCQTLKASDFDISVRRNVVSLISQLSCTFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAIACFSLAAKMLKAEYSATDVQVLLNHGDGGVIFETQTVQRMEGIVLGALQWRMRSITPFSFIPFFVNLFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSVVAASALLYASHELFPFQYPCFLGAISDCSYVNKETVVQCYNVIQDIANEEYESVLNINSTSDTPVNVLDEHFLSLESEKTNGVIQEQEFKRRKIADYGNKPTVPFSHFHQC | 312 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian11g00733 | 312 | CDD | CYCLIN_AtCycD-like_rpt2 | 153 | 244 | - | - | |
Vian11g00733 | 312 | SMART | cyclin_7 | 157 | 246 | IPR013763 | - | |
Vian11g00733 | 312 | SMART | cyclin_7 | 51 | 144 | IPR013763 | - | |
Vian11g00733 | 312 | FunFam | D6-type cyclin | 149 | 242 | - | - | |
Vian11g00733 | 312 | Pfam | Cyclin, N-terminal domain | 34 | 150 | IPR006671 | - | |
Vian11g00733 | 312 | Pfam | Cyclin, C-terminal domain | 153 | 251 | IPR004367 | - | |
Vian11g00733 | 312 | FunFam | D6-type cyclin | 33 | 148 | - | - | |
Vian11g00733 | 312 | Gene3D | - | 33 | 151 | - | - | |
Vian11g00733 | 312 | Gene3D | - | 22 | 242 | - | - | |
Vian11g00733 | 312 | SUPERFAMILY | Cyclin-like | 13 | 150 | IPR036915 | - | |
Vian11g00733 | 312 | SMART | Cyclin_C_2 | 153 | 268 | IPR004367 | - | |
Vian11g00733 | 312 | SUPERFAMILY | Cyclin-like | 134 | 249 | IPR036915 | - | |
Vian11g00733 | 312 | PANTHER | CYCLINS | 50 | 253 | IPR039361 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian11g00733 | Vian-Chr11 | 7870984 | 7872670 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian11g00733 | 1 | 296 | Core Cell Cycle Gene Families | AT4G03270 | 45.161 | 1.12e-80 | 245 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian11g00733 | K18812 | - | gmx:100799951 | 573.548 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian11g00733 | 11 | 7870984 | 7872670 | Vian11g00733 | 11 | 7870984 | 7872670 | ECH | |
Vian11g00733 | 11 | 7870984 | 7872670 | Vian5g00852 | 5 | 28945883 | 28947577 | PCT |