Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00732 ATGGTGGCATTGGTGTGTCTGGGGAAATGGTTCGATATGGCCAATGATTTTCGGTTGAGGTTTGCAAAGGAGATTCGTGGAGAGAGGTTAGTGGTGCTTGATGAACATAACAAGAGGGATATCTTGATTCCTGGAACTGGAGGAGTTACCATTAAAGCGGTTTCTGAGTTACAGATGTCAGAGTTGCTTAATCAGAAATTGACAGTAAAAGGGAAAGTTCCTGACATAACAGAGATGAGGACCCCTTCCTGGGACAACAGAGGACTTAAGAAAGGCACCTGGACTCCAGAGGAAGATAGAAAGCTAGTAGCTTATGTCACTCGATATGGCTCTTGGAATTGGCGCCAACTCCCAAGATTTGCAGATAACGAAATAAAGAACCACTGGCACACCACTCTCAAAAAGCGTTTTGGAAAGAAGGCAGTTTACACTGAAACAAATGTGAAAGCCTCAAAATCAAACAGTTTTGGGTCCAACCCGGACAAGGATTGCATTGAGAACAATGGTTTCTTCCTCGAAGCTTCTCACTCTCCGACAGTTTCTAAAGCCTCTGATCCTGACCCTTTGTCCCCGGAATTATCCTCAAGCGAATTCTCGTCCTCGGATTATACCACTCACCAAAATTTGTTTCTTGAAGATGGGTTCGATTTTCTAGATGCATACTTAGCGGACATGAACCAGAATATTTCGACAGAATCATTTCACATTTCTCAAGTCACATCACAAGCCAATGGTATCGACAATTTTCATGGTTCAGACGCACCGAAAACCATGGAATGTGTTCGGCCGGAGTCTCCTCTTTCTTACTATAATGAAAATTCCCTTGTGGAAAATGACGACTTTGGCTTTCTAGAAGAAATAGAACCAATAACTGAACATTCTTGGACGGAAGCATTCGTGGCAGATATGTCTCTTATTCCGAACGAATTACTTGTTCCTTTGGTGAACGAATCCGAATCGTACTTTTCTTCTGCGTATGACGTGGATGATATCTGGTGTCTGAAAAATAATTCTCATATGATTTAG 1026 0.423 MVALVCLGKWFDMANDFRLRFAKEIRGERLVVLDEHNKRDILIPGTGGVTIKAVSELQMSELLNQKLTVKGKVPDITEMRTPSWDNRGLKKGTWTPEEDRKLVAYVTRYGSWNWRQLPRFADNEIKNHWHTTLKKRFGKKAVYTETNVKASKSNSFGSNPDKDCIENNGFFLEASHSPTVSKASDPDPLSPELSSSEFSSSDYTTHQNLFLEDGFDFLDAYLADMNQNISTESFHISQVTSQANGIDNFHGSDAPKTMECVRPESPLSYYNENSLVENDDFGFLEEIEPITEHSWTEAFVADMSLIPNELLVPLVNESESYFSSAYDVDDIWCLKNNSHMI 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00732 341 SMART sant 90 135 IPR001005 -
Vian11g00732 341 MobiDBLite consensus disorder prediction 177 199 - -
Vian11g00732 341 CDD SANT 93 133 IPR001005 -
Vian11g00732 341 Pfam Myb-like DNA-binding domain 91 132 IPR001005 -
Vian11g00732 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 80 121 - -
Vian11g00732 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 137 IPR017930 -
Vian11g00732 341 Gene3D - 88 139 - -
Vian11g00732 341 SUPERFAMILY Homeodomain-like 84 136 IPR009057 -
Vian11g00732 341 ProSiteProfiles Myb-like domain profile. 86 133 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00732 Vian-Chr11 7862506 7865045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00732 80 122 MYB Transcription Factor Family AT1G34670 55.814 2.94e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian11g00732 Myb_DNA-binding 6.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00732 K09422 - gmx:100811124 194.512