Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00731 ATGGTGAGAACCCCTTGTTGCGACAAAAATGGTCTCAAAAAAGGATCATGGACACAGGAGGAAGACAAGAAGTTGATCGCTTATGTTACCAGGTATGGCCACTGGAATTGGCGCCTGCTCCCCAAGTATGCAGGTCTTGCAAGGTGTGGAAAGAGTTGCAGACTGAGATGGCTGAACTACCTAAGGCCAGATGTGAAAAGAGGGAATTTTAGTGATGAGGAAGAAGAAACCATTGTGAGACTTCACGGAAAGCTTGGTAATAGGTGGTCAACAATTGCTGCTGAATTGCCAGGGAGGACTGATAACGAGATAAAAAACCACTGGCACACCGTCCTCAAGAAGCGATTTCAACAAAATTCTATTGGAAAGGAAGCCGTTATTTCCGAGTCATCGGAGACCTTATCAGAGAACTACAGTGACCTCAACACAACAAGCGATACTTCTGGTTCTGCTTCGGCTGCAGCAGCAACCGCCACAAATGATGAAAGTTATGATGGTCTTTCTGGTTTGGATGCATACACGGAGCCTCTGTCTGTAGATTTCTGGACAGAACCTTATTTAGTTGACAACTCCTATGTCCCACCCGAGTCGGAACCTGTTTACTTCAGTCCTATGTACGAAGTTGAAATTTGGAACCAGAATGAGCTGTTCCTACAGGAATCCATCCTCAACCGTACTCAGCCGTACTCAGCCGTCCTCAGCCGTCCAGCCATTTGGGGGTTCACAGCAAAAACAACAACATATCAGAAATGCACAACGCAGAAGCTTCATAGCACAGTATACAACATCAACAAAAGACATCATCAACAAATCATAAGTTTCGCGGTGGCCGTCGGGACTGAAGATCGCGTGCCCCAGATCGTGACGGTACCGGAGGCGGAGGCGACCCAGTCGCCGTTGAGGGAGAAACGCGCGATGGTGCCGGGCCGGAGGCGACCCACTCGCCGTTGGGGGAGAAACGCCGATGGTGGCCGAGGCAGAGGAGACGAACTTGCGCGAGGTTGA 1005 0.4955 MVRTPCCDKNGLKKGSWTQEEDKKLIAYVTRYGHWNWRLLPKYAGLARCGKSCRLRWLNYLRPDVKRGNFSDEEEETIVRLHGKLGNRWSTIAAELPGRTDNEIKNHWHTVLKKRFQQNSIGKEAVISESSETLSENYSDLNTTSDTSGSASAAAATATNDESYDGLSGLDAYTEPLSVDFWTEPYLVDNSYVPPESEPVYFSPMYEVEIWNQNELFLQESILNRTQPYSAVLSRPAIWGFTAKTTTYQKCTTQKLHSTVYNINKRHHQQIISFAVAVGTEDRVPQIVTVPEAEATQSPLREKRAMVPGRRRPTRRWGRNADGGRGRGDELARG 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00731 334 MobiDBLite consensus disorder prediction 315 334 - -
Vian11g00731 334 CDD SANT 69 112 IPR001005 -
Vian11g00731 334 Gene3D - 68 140 - -
Vian11g00731 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Vian11g00731 334 FunFam MYB-related transcription factor 13 66 - -
Vian11g00731 334 MobiDBLite consensus disorder prediction 137 160 - -
Vian11g00731 334 CDD SANT 16 61 IPR001005 -
Vian11g00731 334 Gene3D - 7 66 - -
Vian11g00731 334 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 191 - -
Vian11g00731 334 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Vian11g00731 334 SMART sant 66 114 IPR001005 -
Vian11g00731 334 SMART sant 13 63 IPR001005 -
Vian11g00731 334 MobiDBLite consensus disorder prediction 294 334 - -
Vian11g00731 334 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Vian11g00731 334 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Vian11g00731 334 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Vian11g00731 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Vian11g00731 334 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00731 Vian-Chr11 7817404 7828637 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00731 1 191 MYB Transcription Factor Family AT2G31180 52.821 8.54e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vian11g00731 Myb_DNA-binding 4.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00731 K09422 - gmx:100815765 292.737