Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00720 ATGAGAAGTGAAGAGATTGTGTTGTCCTTCTCCTTTCTTCTTCTCTGGCTGCCGATATGCTTCGAAATATGTTTGGGTGGAGATACTCTGAAGGCTAACCAGAACATAACTCAGGACTCCGAGGGAAACCTTGTTTCATCCAACGCCACATTTGAGCTGGGCTTCTTTTCTCCTGCTGAAAAAAGTGGAGGGAAATATCTAGGGATTTGGTATCACGGCTTGGAACAACAAACAGTGGTGTGGGTTGCCAACAGAGATGATCCTGTTGCCGATTCCAGTGGAGTTTTTCGAATTGCGGAGGATGGAAATCTGGTGGTAGAAGATGCATTCAAAAGTCGCTGGTCTTCTAAACTTGAACCATCCTCGTTCTCAAACAGAACATTGAAGCTCCTAGATTCTGGGAATCTTGTACTAATAGAGGATGACTCTGAAACGAGATACGTGTGGGAAAGCTTCCGAAACCCAACAGACACGTTTCTTCAGGGCATGAAAATGGACGCGACTTTATCGTTGACTTCTTGGAGAGACTCAGCTGACCCAGCATCTGGGGACTTCACCTTCAAGCTGGATGAAAGTAGAACCTTGGTGGTGTTAAAACAATTGCAACTTTACTGGAAGGAGTCACTTGATGGATCCAATACAAGGATCTATCATTTCTTGAACCTGAACACTTCACGGAACAGGAATTCAAGCAGCTTGTTGTTTCAACCAAATCATCTTAATCACATTAACGGAACATCAAGGCTAATAATGAATTCTAGCGGGGAGATACAGTTTGTGAAGTTGGACGAGGACGATAGGCAATGGGATCAACTGTGGGGGGAACCATCTAGCGTGTGCGACGTGTATGACTATTGCGGGTTCGGCATATGTAACGAGAATAATTTGAATTTGGCCAGTTGCAAATGTTTGCCAGGATTCAGACCCAAGGACGGAAAAAACCTCGGCGAAGGGTGTGTGAGAAAATCAACGTCTTGTACTGACAGGAATGTGACGTTCCTGCACTTAACCAACATAAAAGTGGGTGACCATGGCGAATACCATGATTCGGAAACAGAAGCAGAGTGTGAATCCTTATGCCGTAACCATACCTTTAGCAAGTGTCCTCAGACCCAGTGCCAGGCATATTCATATTCATATAGTTCCCGAAGACAGCTTGATGAAGATGGTCATGGTTATAACTCTACATGCGAGATCTGGACGGGAAGTTTATCCATTCGTGTAGGTGGTCGTCGCAATCTTTCTCTCCTTGTTAAGAGATCAGATATAGAAGCAACTGCAAAATCGTGTAAACCTTGCGGTGTAAACGAGATTCCTTATCCGCTAAGCACTGGGCCAAACTGTGGAGACCCCACGTACAACAAGTTCAATTGCAATGAATTGACGGGCGACCTTAGCTTCGTGATGCCGGGAGGAAAGTCATATCAAGTTAATTCGATCGATGAAGATACCAGAATATTTTACATTATAACAGATCATTCATATTTGTGTGGTTCCAAAAATAAAAATAACACTGTTGAATTTCCATTCAAAGCTGAGTCAGAGTGTTCCAGAAATGATGGAATGGTTATAATCAGCTGGGAAGCAGCGCCAGAACCTCCCTGTAAGAATCCCACAGACTGCGAGAATTGGCTCCATTCGACATGCACTGAAACAAGTAACGGAGATCGCAGGTGCCATTGCAATTCTCACTATAAGTGGAATAACTCAATTATGATATGTGCCCAAGAAAAGCGTTCAACCAACCCACTGGCAATGACTTTGGTAATTTTTAGCAGCATGGTGATTCTGGGATGTATAATAGCATTTCTCATTTTGTGGAGAAAGAGAAAGGCTCATAAGCGTGATAGTGCAGATGAAGCAAGTAGTCGAATTCAAGATAGCTTGTACGAGAGTGAAAGACATGTGAAAGGTTTGATTGGCTTAGGAAGTTTAGAAGAAAACGACATTGAAGGCATTGAAGTGCCCTGTTATACTTTTGCAAGCATTCTAGCAGCTACAGATAATTTCTCAGATTCTAACAAGCTTGGAAAAGGAGGTTATGGACCTGTATACAAGGGAACGTTTTCTGGAGGTCATGATATAGCCGTAAAGAGACTTTCAAATGTTTCCACTCAAGGGTTACAAGAATTCAAAAATGAGGTTATTCTGATTGCCAAACTTCAACACCGGAACCTTGTCAGACTAAGGGGCTATTGCATAAAAGGAGATGAAAAAATCTTGCTTTATGAATACATGCCAAACAAGAGCTTGGACTCCTTCATATTTGACCGAACAAGAACTTTACTTCTAGATTGGCCAATGCGATTCAAGATAATTGTAGGCATTGCGCGAGGCATGCTCTATCTTCACCAAGACTCCAGATTGAGAGTGATTCATAGAGATTTAAAGACTAGCAACATTCTTCTAGATGAGGAGATGAATCCAAAGATATCAGACTTTGGTTTAGCCAAAATATTCGGTGGAAAAGAAACTGAAGCAAGTACAGAAAGAGTAGTGGGAACCTATGGATATATGGCTCCAGAGTATGCATTGGATGGACTTTTCTCAGTCAAATCTGATGTTTTCAGCTTTGGAGTAATAATTCTAGAGATCCTCAGTGGAAAAAAGAACACAGGATTTTATGAATCCAAACAAATTTCTAGCCTTTTGGGTTATGCATGGAAGTTGTGGACAGAGAATAGGCTTCTGGATTTAATGGATTCGTGCATTGGTGAAACCTGCAACGAAAATGAATTCATTAAGTGTGCAATTATTGGGCTATTATGCATTCAAGATGAACCAATCGATCGACCCAGTATGTCAAATGTTTTGTTCATGCTTGACAGAGATACAAAAACCATGCCATTGCCAATTCCCACACAACCAACATTTTTTGTGAACAAGCATTATTCTAGCTCAGCTTCCTCTTCTAGCAAACCAGAGACAAGTCTGCAATTTGACACCAGTTATCAACAAGGTCGATAG 2967 0.4179 MRSEEIVLSFSFLLLWLPICFEICLGGDTLKANQNITQDSEGNLVSSNATFELGFFSPAEKSGGKYLGIWYHGLEQQTVVWVANRDDPVADSSGVFRIAEDGNLVVEDAFKSRWSSKLEPSSFSNRTLKLLDSGNLVLIEDDSETRYVWESFRNPTDTFLQGMKMDATLSLTSWRDSADPASGDFTFKLDESRTLVVLKQLQLYWKESLDGSNTRIYHFLNLNTSRNRNSSSLLFQPNHLNHINGTSRLIMNSSGEIQFVKLDEDDRQWDQLWGEPSSVCDVYDYCGFGICNENNLNLASCKCLPGFRPKDGKNLGEGCVRKSTSCTDRNVTFLHLTNIKVGDHGEYHDSETEAECESLCRNHTFSKCPQTQCQAYSYSYSSRRQLDEDGHGYNSTCEIWTGSLSIRVGGRRNLSLLVKRSDIEATAKSCKPCGVNEIPYPLSTGPNCGDPTYNKFNCNELTGDLSFVMPGGKSYQVNSIDEDTRIFYIITDHSYLCGSKNKNNTVEFPFKAESECSRNDGMVIISWEAAPEPPCKNPTDCENWLHSTCTETSNGDRRCHCNSHYKWNNSIMICAQEKRSTNPLAMTLVIFSSMVILGCIIAFLILWRKRKAHKRDSADEASSRIQDSLYESERHVKGLIGLGSLEENDIEGIEVPCYTFASILAATDNFSDSNKLGKGGYGPVYKGTFSGGHDIAVKRLSNVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDRTRTLLLDWPMRFKIIVGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMNPKISDFGLAKIFGGKETEASTERVVGTYGYMAPEYALDGLFSVKSDVFSFGVIILEILSGKKNTGFYESKQISSLLGYAWKLWTENRLLDLMDSCIGETCNENEFIKCAIIGLLCIQDEPIDRPSMSNVLFMLDRDTKTMPLPIPTQPTFFVNKHYSSSASSSSKPETSLQFDTSYQQGR 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00720 988 SUPERFAMILY Protein kinase-like (PK-like) 655 970 IPR011009 -
Vian11g00720 988 CDD STKc_IRAK 676 943 - -
Vian11g00720 988 Pfam D-mannose binding lectin 78 168 IPR001480 -
Vian11g00720 988 FunFam Receptor-like serine/threonine-protein kinase SD1-8 22 152 - -
Vian11g00720 988 Gene3D - 23 153 IPR036426 -
Vian11g00720 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Vian11g00720 988 ProSiteProfiles Protein kinase domain profile. 670 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00720 988 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 114 967 - -
Vian11g00720 988 CDD B_lectin 44 155 IPR001480 -
Vian11g00720 988 Gene3D Transferase(Phosphotransferase) domain 1 746 949 - -
Vian11g00720 988 MobiDBLite consensus disorder prediction 966 988 - -
Vian11g00720 988 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 637 745 - -
Vian11g00720 988 SMART serkin_6 670 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00720 988 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 179 IPR036426 -
Vian11g00720 988 ProSiteProfiles PAN/Apple domain profile. 326 430 IPR003609 -
Vian11g00720 988 Pfam Protein tyrosine and serine/threonine kinase 673 937 IPR001245 GO:0004672|GO:0006468
Vian11g00720 988 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 746 949 - -
Vian11g00720 988 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Vian11g00720 988 Gene3D Phosphorylase Kinase; domain 1 644 745 - -
Vian11g00720 988 Pfam S-locus glycoprotein domain 225 310 IPR000858 GO:0048544
Vian11g00720 988 SMART blect_4 34 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00720 Vian-Chr11 7643396 7649132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00720 660 983 Receptor kinase-like Gene Family AT4G23140 55.455 1.11e-123 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vian11g00720 PK_Tyr_Ser-Thr 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00720 - - vun:114184726 1655.96