Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00706 ATGGTGGATAGCGGCGATTTGAAGGTTGACGGTGGTGGCTTCAAGCCCCAGCCGAAACGGCAGCGTTTGGAGTCCCCGGTGATCCCGCAGAGCAACCTGGCTCGGCAACGCAGACAGAAGCTGAGCGAGAAAACCCGGTGCCTGCAGAAACTGATGCCGTGGGACAAGAAAATGGACCAAGGCACGCTCCTGGAGGAAGCGTACAAGTACGTGAGGTTTCTTCAGGCGCAGTTCCGCGTGCTACAGTCGATGCCCTCCCATTCGTCTTCTTCCTCGCCTTCCTTCCGCCAAAACTCAGCAGTATTCGTGGATCTGGAGAAACTGAATCGCTCCCAGCTACTGCAGCCGTTAAGGAAAGGGCAGGTGCATTGTAGGGAGCATGGAAAGAGCATAGAAGAACGCAACAATGGAAAAAGACGAAAAAGAAAGCAGAAGACCCACACACAGTCACTGCTGAAGCAGATGAACGAATACTGGGAGAAGAACTTGTACTGA 495 0.5354 MVDSGDLKVDGGGFKPQPKRQRLESPVIPQSNLARQRRQKLSEKTRCLQKLMPWDKKMDQGTLLEEAYKYVRFLQAQFRVLQSMPSHSSSSSPSFRQNSAVFVDLEKLNRSQLLQPLRKGQVHCREHGKSIEERNNGKRRKRKQKTHTQSLLKQMNEYWEKNLY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00706 164 Gene3D - 29 93 IPR036638 GO:0046983
Vian11g00706 164 MobiDBLite consensus disorder prediction 122 137 - -
Vian11g00706 164 MobiDBLite consensus disorder prediction 122 148 - -
Vian11g00706 164 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 17 122 IPR045843 GO:0003700|GO:0006355
Vian11g00706 164 MobiDBLite consensus disorder prediction 1 41 - -
Vian11g00706 164 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 25 74 IPR011598 GO:0046983
Vian11g00706 164 SMART finulus 31 80 IPR011598 GO:0046983
Vian11g00706 164 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 31 85 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00706 Vian-Chr11 7477706 7485474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00706 17 84 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 44.118 1.52e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vian11g00706 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00706 - - var:108319487 143.665