Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00701 ATGGACATGAATTCCTCAAGTGGTGCCTCCGGTTGGCTTTATGATTATGGCTTTGATATCCCTGTTGCCGGTGCTGACTTCATGGTTGCAGCAGACTCTGGAGGTTTTAGTTGGGGGCCTCAAAATCACACCTTGAAAGGTCCTTCACATACGAGCTTGGAAATGGAATACTCACTGGATTCAACTGTTCTGGAAAATAGTCCTTCAAAGCGGTTAAAGACCGAGTCATGTGCATCTGGCGCCAAGGCGTGTCGCGAAAAAATGCGAAGGGATAAACTGAATGATAGGCATGCTATTACCTTGCGTCTTATGTTTCTGGAATTGAGTTCCATCTTGGAGCCTGGTAGGCCGCCCAAAACAGACAAAGTTGCAATATTAAGTGATGCTGCTCGAGTGGTAGTCCAATTGAGAAATGAAACCGAGAGGCTTAAGGAAATGAATGATGAACTACAGGGAAAAGTTAAAGAATTGAAGGCTGAGAAGAATGAGCTTCGTGACGAGAAGAATATGCTGAAGGAAGAGAAAGAAAAGTTGGAGCAGCAGGTAAAACTGACAAATATACAGAACAGCTTCCTCCCTCAAGGCCCAGCTGCTAAAGGACAAGTTGGTACCCATAAGCTGATACCATTCATTGGCTATCCTGGAATTGCTATGTGGCAGTTTATGCCCCCTGCTGCAGTTGATACATCGAAGGATCATCTGCTTCGACCTCCAGTTGCATAA 723 0.4509 MDMNSSSGASGWLYDYGFDIPVAGADFMVAADSGGFSWGPQNHTLKGPSHTSLEMEYSLDSTVLENSPSKRLKTESCASGAKACREKMRRDKLNDRHAITLRLMFLELSSILEPGRPPKTDKVAILSDAARVVVQLRNETERLKEMNDELQGKVKELKAEKNELRDEKNMLKEEKEKLEQQVKLTNIQNSFLPQGPAAKGQVGTHKLIPFIGYPGIAMWQFMPPAAVDTSKDHLLRPPVA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00701 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 136 IPR011598 GO:0046983
Vian11g00701 240 CDD bHLH_AtILR3_like 82 165 - -
Vian11g00701 240 PANTHER BHLH TRANSCRIPTION FACTOR 4 240 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Vian11g00701 240 Coils Coil 126 188 - -
Vian11g00701 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 69 151 IPR036638 GO:0046983
Vian11g00701 240 Gene3D - 81 166 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00701 Vian-Chr11 7409205 7410977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00701 35 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 53.917 4.79e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00701 - - gmx:100806838 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00701 11 7409205 7410977 Vian11g00701 11 7409205 7410977 ECH