Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00695 ATGGAACCTCTGTGTGAGTTTTGTTGGGCTGTGATAGCTGTGGTTTATTGCAAGTCAGATTGTGCTCGTCTCTGCTTGCATTGCGATGGCTGTGTGCACTCTGCAAATTCTCTGTCTCGCAGGCATTCGCGTTCTCTCCTTTGTGATAAGTGCTATTCCCAGCCAGCAGTGATACGTTGCATGGATCATAAGTTGTCCTCGTGTCAAAGTTGTGACTGGAACCCGACTGCTTGTTTTGCAGCGGGACATAGGCGCCTCACGTTGAATTGTTACAATGGTTGTCCTTCTTTGTCGGAGTTTTCTAGGATGTGGTCCTTTGTGTTTGATGATAGTTCCTCACAAGCTGGTTGGGAATCTGTTAGCACTTTGCTAAAAAGTGATAGCTGCACTAGCCTGGAGCAACCTGATCACAATGGTGGTTCCTTTAGTTTGGTGATTGAGAAGTTGGATGAAATTGAATCTTGTGTCAGATATGAACCTTGGATGGGGCAACCTCACATCATTCCTTCAAATCCAAATTACACACCGTACTGCAAGGAAGAAAGATTTTTCCTAGCTCAGGACTCAAACCAGCCAAAGGAGTGTACTGATCGAGGAACTGGTGATGGGAATGGACTCTCTGAAGGTCTCAATGTGGACAGAGCTCCAATAAATTTTGAAAGTGCTGAAGAAATATTTGGCTGTTCACAAGCTGCCACTAGATACCCTCTTGAAGATGGAGGAGTGGACTGTCTATTGATGGATAAAAAATTATCAGTCACCGAATCTAGTTCACTTATTGAGAGTGCCTTAGAGGCATCATCATCAATTCAACAAGATTGTGTGGCTTTTCAGTCATCTAGGACACCTGGATCAGTTAGTATGTTGCAGGTTATGAACAGTAACACAAACTGTGCACTTATGAATCCTAGCAGCACTGGAAACATCAGTCTGGGATTTTCTCAGGGTCAAGTTCATTCAAGCATACCTCTTCAATTAGGCAACATTGTGGGTGAAAATAGTTCTACTGAATATCAAGACTACGGGATATCGCCAATGTTTCTGCCGGGTGAAATCCCCTGGGAATCAAATATGGAGGGTACATGCCCACAAGCAAGGGATAAGGCTAAAATGAGATACAATGAGAAAAAGAAAACTCGAACGTTTGGTAAGCAAATAAGATATGCATCTCGGAAAGCAAGGGCCGATACTAGAAAACGTGTGAAAGGTAGATTTGTTAAAGCAGGCGAAGCATATGATTATGACCCTCTTGTGACAAGGGAGGTCTAA 1269 0.4342 MEPLCEFCWAVIAVVYCKSDCARLCLHCDGCVHSANSLSRRHSRSLLCDKCYSQPAVIRCMDHKLSSCQSCDWNPTACFAAGHRRLTLNCYNGCPSLSEFSRMWSFVFDDSSSQAGWESVSTLLKSDSCTSLEQPDHNGGSFSLVIEKLDEIESCVRYEPWMGQPHIIPSNPNYTPYCKEERFFLAQDSNQPKECTDRGTGDGNGLSEGLNVDRAPINFESAEEIFGCSQAATRYPLEDGGVDCLLMDKKLSVTESSSLIESALEASSSIQQDCVAFQSSRTPGSVSMLQVMNSNTNCALMNPSSTGNISLGFSQGQVHSSIPLQLGNIVGENSSTEYQDYGISPMFLPGEIPWESNMEGTCPQARDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLVTREV 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00695 422 SMART bboxneu5 1 47 IPR000315 GO:0008270
Vian11g00695 422 CDD Bbox1_BBX-like 4 47 - -
Vian11g00695 422 ProSiteProfiles CCT domain profile. 366 408 IPR010402 GO:0005515
Vian11g00695 422 Pfam CCT motif 366 408 IPR010402 GO:0005515
Vian11g00695 422 MobiDBLite consensus disorder prediction 190 211 - -
Vian11g00695 422 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00695 Vian-Chr11 7345764 7348148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00695 1 416 C2C2-CO-like Transcription Factor Family AT3G21880 43.198 7.51e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vian11g00695 CCT 1.4e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00695 - - vra:106761521 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00695 11 7345764 7348148 Vian11g00695 11 7345764 7348148 ECH