Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00692 ATGGAGCCCGTTTGCCCTATTGGGTTGGCGTGTGCCTCTGAAATCTCTGCTCTTCTCTCTCCTCCCTCACCTCTTCAAGTACAGGAATATTATCACAACCTTTTGTCTTCAAGAGGGTGCTCTGGTATCTCAGTCAAACAGGATGGCAACTTTGGAAAAGGTGTATATGCAGACATGGACTTCAAAGAGGGAGAACTTGTTCTGAAGGACCCCATGTTTGTAGGGGTTCAACATTCCCTTAACAAGATTGATTGTTTGGTCTGTAGTTTCTGCTTTCGTTTCATTGGTTCCATTGAACTTCAAATAGGAAGGAGGCTTTACATGAAGCAACTAAGGGCCAATGAGAGTCATGGATGTGATGTCAGAAACTCTTCACAACACTTCCATGGAATGGATTCATCTGATGAAGAAGAGAATACTCAGCAATGTACTTCTGGGATTTCCAAAACTAAGATTCCTCTTCCTGAGGGTGTTGTGGAATCATTAATGAAGGGCCAACTGATGTTGCCTTGCTCCGAGAAGTTCACCTTGTTGCCGGCTGTTCCATGCCCTGGTGGATGTGGAGAAGTTTACTATTGCAGCATGTCATGTGCAGAGGCTGATTGGGAATCCTCCCATTTGTTACTCTGTACTGGTGAGAGTTCTGATCCAGCTCGTAGAGAGGCACTCCTTAAATTCATCAAACATGCTAATGAAACAAATGATATATTCATACTTGCTGCAAAGGCTATTTCTTCAACCATATTAAGATATCGCAAGTTAAAAGCAGCCAGTCTTGAAAAACAAGTGAAACATGATACATCCTGTGTTTCAAATCACCGTAGTTTATCTTTTCTTTTGGAAGCTTGGAGGCCTATATCAATGGGACACAAGAGAAGGTGGTGGGACTGTATTGCTTTGCCAGATGATGTGGATTCTTCTGACGAAGCATCATTCAGGCTGCAAATCAAAGAGTTGGCATTTGAGTCTCTACAACTTCTTAAGGCAGCCATATTTGACAAGGAATTATTCTCCCTTGAAATCTATGGACATATCATTGGCATGTTTGAGCTGAATAATCTTGATTTGGTTGTGGCTTCTCCGGTGGAGGATTACTTTTTATACATTGATGATCTGACACATCCTAACAAGGAAGAGGCTGAGAAAATTACGCAACCTATTCTGGATGCACTTGGTGAAGACTATTCTATTTGTTGCGAAGGGACTGCATTTTTTCCTTTGCAAAGCTGCATGAACCATTCCTGTTGTCCTAATGCCAAAGCTTTCAAAAGAGATGAGGATAAAGATGGCCAAGCAACAATAATTGCACATAGGTTCATTCGTAAAGGAGAAGAGATAACCATATCATATGTTGATGAGGACCTTCCATTTGAAGAGAGGCAGGCATCCCTTGCAGATTATGGTTTCAGATGCAGGTGTCCAAAGTGCATTGAAGAAGAGCCATAA 1446 0.4191 MEPVCPIGLACASEISALLSPPSPLQVQEYYHNLLSSRGCSGISVKQDGNFGKGVYADMDFKEGELVLKDPMFVGVQHSLNKIDCLVCSFCFRFIGSIELQIGRRLYMKQLRANESHGCDVRNSSQHFHGMDSSDEEENTQQCTSGISKTKIPLPEGVVESLMKGQLMLPCSEKFTLLPAVPCPGGCGEVYYCSMSCAEADWESSHLLLCTGESSDPARREALLKFIKHANETNDIFILAAKAISSTILRYRKLKAASLEKQVKHDTSCVSNHRSLSFLLEAWRPISMGHKRRWWDCIALPDDVDSSDEASFRLQIKELAFESLQLLKAAIFDKELFSLEIYGHIIGMFELNNLDLVVASPVEDYFLYIDDLTHPNKEEAEKITQPILDALGEDYSICCEGTAFFPLQSCMNHSCCPNAKAFKRDEDKDGQATIIAHRFIRKGEEITISYVDEDLPFEERQASLADYGFRCRCPKCIEEEP 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00692 481 MobiDBLite consensus disorder prediction 128 147 - -
Vian11g00692 481 Pfam SET domain 52 450 IPR001214 GO:0005515
Vian11g00692 481 SUPERFAMILY HIT/MYND zinc finger-like 178 211 - -
Vian11g00692 481 Pfam MYND finger 181 210 IPR002893 -
Vian11g00692 481 ProSiteProfiles SET domain profile. 41 451 IPR001214 GO:0005515
Vian11g00692 481 CDD SET_SMYD 390 476 - -
Vian11g00692 481 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 480 IPR044237 GO:0008168
Vian11g00692 481 SUPERFAMILY SET domain 41 476 IPR046341 -
Vian11g00692 481 Gene3D SET domain 371 480 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vian11g00692 SET 2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00692 - - gmx:100803651 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00692 11 7309675 7315226 Vian11g00692 11 7309675 7315226 ECH