Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00687 ATGGTCAACCTCCACCTCAACTTCAACTACCGTTCTTCTCTGTTTCTTTCCACTCCCTCCCAAATCTTCAACAGCAACCATTGTTCTTCTCCTTCTATTAATACCTCTCAACAAAACTCCTTTTCTTCAACACACACTTCATCCTCCACCACTCTCAAACCTCCACCTCCTTCAATGGCTGACTCCAATACCTCTTCCACTCAAACTTCTTCACATTCTTCTGTGAAAGATGATAAAATCTGTTTAGATTCAGGGAAGCGTGGATCTTCCAAGGTTGAATTTTCTGAAGATGAGGAAACTCTTATAATCAGGATGTATAAACTGGTTGGGAAAAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACAGCAGACGAAATAGAGAAGTATTGGACTTCGAGACTCTCGAGTTCTAGTAAATGA 426 0.4108 MVNLHLNFNYRSSLFLSTPSQIFNSNHCSSPSINTSQQNSFSSTHTSSSTTLKPPPPSMADSNTSSTQTSSHSSVKDDKICLDSGKRGSSKVEFSEDEETLIIRMYKLVGKRWSLIAGRIPGRTADEIEKYWTSRLSSSSK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00687 141 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Vian11g00687 141 SUPERFAMILY Homeodomain-like 92 136 IPR009057 -
Vian11g00687 141 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 140 IPR017930 -
Vian11g00687 141 SMART sant 90 138 IPR001005 -
Vian11g00687 141 MobiDBLite consensus disorder prediction 76 94 - -
Vian11g00687 141 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 88 138 - -
Vian11g00687 141 MobiDBLite consensus disorder prediction 29 75 - -
Vian11g00687 141 Pfam Myb-like DNA-binding domain 92 134 IPR001005 -
Vian11g00687 141 FunFam MYB-like transcription factor 93 135 - -
Vian11g00687 141 CDD SANT 93 136 IPR001005 -
Vian11g00687 141 Gene3D - 93 138 - -
Vian11g00687 141 MobiDBLite consensus disorder prediction 29 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00687 Vian-Chr11 7261183 7262381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00687 86 137 MYB Transcription Factor Family AT5G14750 55.769 6.37e-16 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian11g00687 Myb_DNA-binding 5.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00687 - - gmx:100801532 117.857