Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00670 ATGGCGCGGACAGTCTCTAACAACGACATCACCAACGATGAAACAGGCGATGACAGCAATGCTACAACGAAGGAAGAGGGCGAGGTCAAAGGTCGCGTGAGGAAGGGACCCTGGACCCCATCAGAAGACGCCATCCTTGTAGAGTACGTGAAGAAGCACGGTGAAGGGAATTGGAACTCCGTGCACAAGAATTCTGGGTTGTTCAGGTGCGGCAAAAGTTGCAGACTTCGCTGGGCAAACCATCTCAGGCCTAATCTCAAGAAAGTGAACACCCATTGCTATCCATCGATGGCAAAGAACCAGAGACAGAGAAAGGGTTACCTTCCTGCTCTATGTGCTTATCTGTTTGTGTTGGGTTACAATTTTACTGGGACCGACAATGAAATAAAAAACTTTTGGAACACCAGAATGAAAAGGCGTCAGAGAGCAGGGTTACCCATTTATCCTCCTGAGCTGCATGCAGAAGCCACTGCATTCAATCTACAACACCGCTACTTGGAAGACATACCTCATTCATCATTTGCTTTACTCCTATCTTCTTGTTACCCCAAGAAGCTCGATGACCCTAGCCAAACCAACGGTTTCAATGCCAATCCGCTGCAAAACCATCCTGATTCTGCCAACTTTTACATTAATCCATGCCTGAAGCACTTCAAGTTTTCCAATGACAATGGTGGAAGTACAAATCTTGCTTTGCCATTATCTCCTCTTTCTCAATATGGATCATCATCATCCACCCTTCTTAACCACAGTTTTGGTGATCATGGCATTATATCAGGGTCCCCATATGAATCCTTTCCTTTGGTATCAGGGTCCACCCCTGACATCTCTTCCAACCAAACACCAACCCCTGCTTCATCCTATGCTAGTGGTGTTGATGGCCTGATGGGATCTTCCACCATGGCTAATAATAATAATAATAACAATGACTACTATGAAGTTGCACCGTTGTCTCCTCCAGGAAACAGTGGACTGCTGGATGCTCTAGTGATGGAGGCTCAAGGACTTTCTCACAATAACAAGTCCAAGAATGAGGAGGACCCGACCCTTGCTGGAAAACTATCTTGTAAGAGAAAGAACATGGAATATGCGGATGAGGGACGCACTGAGCCTATGGTGTCAGCCATGAAGAAGAACAGTAGCAACTGTACTACTACTGAAAACCAGAGGGATGATGATAATAGCTTCTCTCAATTGTCAAAAGGGAAGAAAGTGATGAGAGAGGATCCGATGGAAGAGATGAATTCGATGGACGATGATTTGTTTAGTCTGCTGAATCAGTTTCCCTTAGAAACGCCAATGCCTGAGTGGTACCGTAGAGGGGAGAGTCAGTCATTGGGACTTGAAAATCAGCCGAATGCTTCACCACCTGACCCCGCTGATCAAGAGTATGCTTGGACTCTAGGAACTTGCTGGAACAACATGCCCAGCATATGCTAA 1440 0.4597 MARTVSNNDITNDETGDDSNATTKEEGEVKGRVRKGPWTPSEDAILVEYVKKHGEGNWNSVHKNSGLFRCGKSCRLRWANHLRPNLKKVNTHCYPSMAKNQRQRKGYLPALCAYLFVLGYNFTGTDNEIKNFWNTRMKRRQRAGLPIYPPELHAEATAFNLQHRYLEDIPHSSFALLLSSCYPKKLDDPSQTNGFNANPLQNHPDSANFYINPCLKHFKFSNDNGGSTNLALPLSPLSQYGSSSSTLLNHSFGDHGIISGSPYESFPLVSGSTPDISSNQTPTPASSYASGVDGLMGSSTMANNNNNNNDYYEVAPLSPPGNSGLLDALVMEAQGLSHNNKSKNEEDPTLAGKLSCKRKNMEYADEGRTEPMVSAMKKNSSNCTTTENQRDDDNSFSQLSKGKKVMREDPMEEMNSMDDDLFSLLNQFPLETPMPEWYRRGESQSLGLENQPNASPPDPADQEYAWTLGTCWNNMPSIC 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00670 479 Gene3D - 35 88 - -
Vian11g00670 479 MobiDBLite consensus disorder prediction 1 17 - -
Vian11g00670 479 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Vian11g00670 479 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 86 IPR017930 -
Vian11g00670 479 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 88 - -
Vian11g00670 479 MobiDBLite consensus disorder prediction 375 393 - -
Vian11g00670 479 MobiDBLite consensus disorder prediction 1 36 - -
Vian11g00670 479 MobiDBLite consensus disorder prediction 18 36 - -
Vian11g00670 479 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Vian11g00670 479 CDD SANT 37 82 IPR001005 -
Vian11g00670 479 SMART sant 34 84 IPR001005 -
Vian11g00670 479 MobiDBLite consensus disorder prediction 375 404 - -
Vian11g00670 479 FunFam MYB-related transcription factor 34 87 - -
Vian11g00670 479 SUPERFAMILY Homeodomain-like 36 89 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00670 Vian-Chr11 7003824 7006192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00670 31 479 MYB Transcription Factor Family AT2G32460 33.208 2.17e-53 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian11g00670 Myb_DNA-binding 8.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00670 K09422 - gmx:100798860 639.032