Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00660 ATGGAGACTCGTGCCGCCTCAAAGAGAAAGGCAAACGCTATGGTCTTGGTCCAAAAACAACACCCCAAAAGGCATAGGGTTTCTTTGGTTCAAGATCCTCCCAAAGAGAAATTGCAAGGTGTGAAGAATCCCAATACAAAGAAGCAATCTTCCACAATCCACCACTCTTCTTCTCCCCGTACTGATGAATCCCTCTTTTCCCATGTCTATGAGTATCTTCATGAAATGGAGATGCAGAAAAAGAGGAGACCAACTGTTGACTACATTGAGAAAGTTCAGAAATTGTTTACACCAACCATGAGAGCAATCTTGGTGGATTGGTTAGTAGAAGTGGGTGAGGAGTACAAGCTTCTTCCAGACACTCTTCATCTCTCAGTTTCGTACATTGATAGGTTTTTATCGGTTAATCCGGTGAATAAATCCAGACTTCAGTTGTTGGGTGTTTCCTCCATGCTTATTGCATCCAAATACGAGGAAATTGACCCACCTTGTGTGAATGATTTTTGCAGCATCACTGATTACACATATGACAAGGCAGAGGTTGTGAAGATGGAAGCTGACATACTGCAGTCACTAAAGTTTGAAATGGGAAATCCTACTGTGAACACTTTTCTCAGAAGGTTTGCTGATAACGAAATGACTCCAAATTCACAGATTGAATTTCTGGGCCGCTATCTTGCTGAGTTAAGTTTGTTGGATTATGATTGTTTGAAATTTTTGCCTTCGGTTGTGGCCGCATCTGCTGTATTTCTTTCTAGATTTCTTATTTCGCCTGAAGTGCATCCATGGACTCCTTCTTTGAGTGAATGTTCTGGTTACAAATCAGCCGAATTGAAAGAATGTGTCTTAATTTTGCATGACCTGTACTTGTTACGAAAAGCAGCATCCTTCAAAGCTGTCCGGGATAAGTACAAGCAGCAAAAGTTCAAATGCGTTGCAAATCTGCCTTCCCCTCCTTATGTACCCAATTGTTACTTTGAAGACCAGGGATGCAGCAAATTTTGTGATGAATTATCTCTTAAGTCATGTTTGATAAAGCACATGGTTTGA 1050 0.4095 METRAASKRKANAMVLVQKQHPKRHRVSLVQDPPKEKLQGVKNPNTKKQSSTIHHSSSPRTDESLFSHVYEYLHEMEMQKKRRPTVDYIEKVQKLFTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSVNPVNKSRLQLLGVSSMLIASKYEEIDPPCVNDFCSITDYTYDKAEVVKMEADILQSLKFEMGNPTVNTFLRRFADNEMTPNSQIEFLGRYLAELSLLDYDCLKFLPSVVAASAVFLSRFLISPEVHPWTPSLSECSGYKSAELKECVLILHDLYLLRKAASFKAVRDKYKQQKFKCVANLPSPPYVPNCYFEDQGCSKFCDELSLKSCLIKHMV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00660 349 SMART cyclin_7 203 287 IPR013763 -
Vian11g00660 349 SMART cyclin_7 106 190 IPR013763 -
Vian11g00660 349 Pfam Cyclin, C-terminal domain 199 317 IPR004367 -
Vian11g00660 349 Gene3D - 69 314 - -
Vian11g00660 349 PIRSF Cyclin_A_B_D_E 1 323 IPR046965 GO:0016538|GO:0044772
Vian11g00660 349 MobiDBLite consensus disorder prediction 1 61 - -
Vian11g00660 349 PANTHER CYCLINS 62 312 IPR039361 -
Vian11g00660 349 Gene3D - 82 197 - -
Vian11g00660 349 ProSitePatterns Cyclins signature. 101 132 IPR006671 -
Vian11g00660 349 SMART Cyclin_C_2 199 318 IPR004367 -
Vian11g00660 349 CDD CYCLIN_AtCycA-like_rpt2 199 309 - -
Vian11g00660 349 FunFam Cyclin A1 186 314 - -
Vian11g00660 349 SUPERFAMILY Cyclin-like 199 320 IPR036915 -
Vian11g00660 349 Pfam Cyclin, N-terminal domain 69 196 IPR006671 -
Vian11g00660 349 SUPERFAMILY Cyclin-like 72 196 IPR036915 -
Vian11g00660 349 MobiDBLite consensus disorder prediction 43 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00660 Vian-Chr11 6881647 6882696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00660 3 328 Core Cell Cycle Gene Families AT5G43080 53.982 3.24e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00660 K06627 - gmx:547779 504.597