Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00646 ATGCCTCAATCGAACTTTGGAAAGAATGAAACACAGCTTGCCGAACCACAAATGTCCCAATTAAAACCAAAACGCAGATTAGGGTTCTTCCGGAGCCCTAGAAATCATAACATTGAGCGCTTGTTGAACCGGTTTAAAACCATCTTTTTTCCTGGCCTGCATGCAAGTGTGAAATTGAGGGAGTTTGAAGACAGTGGCGGCGTTTGTTTGGTGAGAGAAGTGAAAGGCTTCGATGAAAGAAGCGATCATTTTTACAGACACGTGCAGTTCTTGGGACGCTTGCGACATCGCCACCTTCTCTCGCTCAGAGAAGTGGACGTGGATCACTGTTTGTTGCTCATATTTGACAATATAGAAAATGGAAGCTTGAAGGATCATCTAAACGACCCTTTGAAGACTCCCTTAGATTGGAGGACGAGGTTGCAGATAGCCAATGGCGTTGTGGCTGCACTGGAATATTTGTTTCTCTTCAGTGAACCACCCGTATGTCATGTCTCTATCACCTCAAGCAATATTATGTTAGATGAGAACTTCACAGCCAAGTTATCTGACTTTGGCCTTCTTCCATCGGGTGGAAATTCTGATACGATGCCATATTCAGAAGACTGCTTGAAGCAGAAAAGTTGTAGGATTATATTCCAACTTGGAGTACTCATACTAGAATTGGTCACCGGACAGTCTTCAGAGATGGAAGGTTCCGATTTAATTGAATGGATCCAAGAATCACGATTTTACAATTCCATTGATAAGATGATAGACCCTGATCTTGGTAACAACTATGACTGTACGGAGCTTAAAAGTCTTCTCGCTGTGGCAAAACTATGTATAAAATCATGGGATGAGCCCTCATTTACAATTCCTCAGTTATTCCGGCATCTCCAGAGGAAGATTCATATTACTCATCAATAG 909 0.4235 MPQSNFGKNETQLAEPQMSQLKPKRRLGFFRSPRNHNIERLLNRFKTIFFPGLHASVKLREFEDSGGVCLVREVKGFDERSDHFYRHVQFLGRLRHRHLLSLREVDVDHCLLLIFDNIENGSLKDHLNDPLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLLPSGGNSDTMPYSEDCLKQKSCRIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYNSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDEPSFTIPQLFRHLQRKIHITHQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00646 302 ProSiteProfiles Protein kinase domain profile. 43 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00646 302 FunFam probable receptor-like protein kinase At1g49730 212 301 - -
Vian11g00646 302 Gene3D Transferase(Phosphotransferase) domain 1 212 301 - -
Vian11g00646 302 PANTHER OS01G0253100 PROTEIN 62 297 - -
Vian11g00646 302 FunFam Protein kinase superfamily protein 118 208 - -
Vian11g00646 302 Pfam Protein tyrosine and serine/threonine kinase 79 195 IPR001245 GO:0004672|GO:0006468
Vian11g00646 302 Gene3D Transferase(Phosphotransferase) domain 1 34 211 - -
Vian11g00646 302 SUPERFAMILY Protein kinase-like (PK-like) 52 268 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00646 Vian-Chr11 6682578 6687762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00646 30 293 Receptor kinase-like Gene Family AT3G19300 33.564 2.02e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Vian11g00646 PK_Tyr_Ser-Thr 2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00646 - - gmx:100791979 421.009