Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00640 ATGTTCTCAACCCCATTTGTGTTAACCTTCTCCCTCCTCCTCTCCCTCCCAATCCTCTTCTTCCTCGCTCCTCGGATCCTTCCTCCCAAACCCCACTCTCTACCAATCTCCCCCTCCGACGAACTCGATGACATCAACCTCTTCAACCGCGCCATCACCCTCGCCAATTCCCGCGCCTCCACCGCCTCCGCCACCAACCCCTCCAAATTCTTCCACCTCTCATCCAAAAACCCCTCTCTCAAAATAGCCTTCCTTTTCCTCACAAACACCGATCTGCACTTCTCCCCCCTCTGGGACCTCTTCTTCCACGACACCCCGTCTAACCTCTTCAACATCTACATCCACGCCGACCCCTCCGTCAACATCACGCGCCCTCTCTCGCCGCTCTTCGCCAACAAATTCATCCCCTCCAAACGCACCTTCCGCGCCTCCCCCACCCTCATCTCCGCCACGCGCCGCCTCCTCGCCACTGCCCTCCTCGACGACCCCGCCAACGCCTACTTCGCCCTCCTCTCCCAGCACTGCGTCCCTCTCCACTCCTTCACCTACACCTACCACTCCCTCCTCGTCTCCCCCACCTTCGACTCCTCCGATCCCGAATCCTCCCGCCTCGGCATCCGCCTCAAGTACAAATCTTTCATCGAAATCCTCTCCCACGCTCCCAGGCTCTGGAAACGCTACTCCTCCCGCGGCCGCTACGCCTTGATGCCCGAAGTGGAAAAGGTCAATGAAGAGATTTATGAAAAGATCATATTGCTTTGGCTATGGCTTGATGGTGGTGTATGGTTTGAAGAGGCACGTATAGCCCACATCCTATATACCCTGTGCTTTCAAATTACGAGTCTTGGGACTGCACAAATGAGGGAATCAGATCAAAATAGAAAGAGCCAAGAAACAGGAAAACAAATTCTGTCCATATTTGGCCAATTTCTTGCTTCCCCATTCTCGATTCGATCCCTTTGGAACCTTGCTATTTCCACCGCCCTGTTTGTTCATTCCGGGAGGAACCTTAATAGCATCAAAGAGGAAGTTAGACCCAGAAACCAATTCAACCATCAGCACCACCATCTCATTCCAGAAACAGATCTAAACCCTCAAATCTCTTCCATAATCCAATCAACTAGGGGCAAGTCCACCATATCCTCCTTGCTCCTCTCCACTTTCTCCAACAATACTCCCTCCTCCAATAATGACACCCCCACCATCAATGTCACTGTCCAAAGCAAGAAAAAAACCAACTTTCTGCAGCAACCAATTCAACCACCGATTGGGAAGGGAAGAAAACAAGAAAGAAAAAGCACAAGAGAACCACCAGCGGCGGCAAGAACAAGACTATCCATGACGGGATTCTGGAGGGTTCTAATCCTGGGTGGGTGTGTGGATTTTCAAGATGTTTGGTGTGGCCCTGGCATTGGGTTCTCAGCAGATGTTGTTGCCTCTATCGATTGTGTTGTGGCCCAGAAGAAAGTATCTACAAGAGGGAAAATTGATGTGGAGTAG 1500 0.5173 MFSTPFVLTFSLLLSLPILFFLAPRILPPKPHSLPISPSDELDDINLFNRAITLANSRASTASATNPSKFFHLSSKNPSLKIAFLFLTNTDLHFSPLWDLFFHDTPSNLFNIYIHADPSVNITRPLSPLFANKFIPSKRTFRASPTLISATRRLLATALLDDPANAYFALLSQHCVPLHSFTYTYHSLLVSPTFDSSDPESSRLGIRLKYKSFIEILSHAPRLWKRYSSRGRYALMPEVEKVNEEIYEKIILLWLWLDGGVWFEEARIAHILYTLCFQITSLGTAQMRESDQNRKSQETGKQILSIFGQFLASPFSIRSLWNLAISTALFVHSGRNLNSIKEEVRPRNQFNHQHHHLIPETDLNPQISSIIQSTRGKSTISSLLLSTFSNNTPSSNNDTPTINVTVQSKKKTNFLQQPIQPPIGKGRKQERKSTREPPAAARTRLSMTGFWRVLILGGCVDFQDVWCGPGIGFSADVVASIDCVVAQKKVSTRGKIDVE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00640 499 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 22 241 IPR044174 GO:0016757
Vian11g00640 499 MobiDBLite consensus disorder prediction 417 440 - -
Vian11g00640 499 Pfam Core-2/I-Branching enzyme 82 191 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00640 Vian-Chr11 6606897 6613939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00640 459 499 C3H Transcription Factor Family AT1G73760 47.826 2.80e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00640 - - vum:124846317 411.764