Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00625 ATGGGGTTTTTGTTGAAAGAAGCTTTGAGGACTCTCTGCGGTCGGAATCAATGGTCTTACGCTGTGTTCTGGAAGATCGGTTGCCACAATTCTAAGTTATTAATCTGGGAAGAATGCTACTATGAACCTTTGCCATGCCCTCCACCCACGTTTGGGATGGGAGATTTGCCTTACCAGAATGGGGGAGGACACTGGTTTTCTTCAGGTTCTCAGCCATCTCAACTTGGGATTCAAGAGGAGGACCGAGTCAATTCATTGATTAACAAAATGACTGTAAACAATTCAGTTATCATTGCAGGTGAAGGTACGATTGGACGGGCTGCATTTACAGGCAGCCATCAGTGGATTCTTTTGAACAGTTTCACAAAAGATGTATATCCACAAGAGTTATACCCTGAAGTGCATCACCAATTTTCAGCTGGAATACAGACAGTAGCAGTTATTCCTGTACTTCCTCACGGGGTTTGTCAATTTGGTTCTTTCTTACCCATAAATGAGAATATGGGATTTGTGAATGATGTGAAGAGCTTGATCTTGCAATTAGGATGTGTTCCTGGTGCCCTTCTATCTGAAGACTATTCGGCAAATCTCTCTATTGAACGATTTGCTGGACCTTCCATTACTGGTGTGCCAGTGTCTATCAATCCACCTGTCATTACGTCAAATTGCACTCTCTCAGTAGCTAATGCCTCCAATCAGAAAAGTAATTCATTTCATACTTCAAGGCCTTTTGTTCAAACACCTTGCCATTTAAATGCGGAGACAAGTGCATGCCAGGGTTCTGCACTGACACTGGAAACCTGTAAACTGAACCAGATACCCAGCAACCATTACCAACCAAATGTTATTCCAATGAGTGAAACACACTTTTCTGGCCAACAACGGAATGGAGCTATGGAGGCTGAAGTGATAATCTCAGATGTTGATTCATGTCAGCAGCAACATTCTGTTTCACATAATGCTAGATCTACATTCGATAACTTGACTGGTTCTGGGTCTTTTGGTCAATCTGGTCAAAGTGAGGATCATCTAACATTAATGGAGCAACAAATTATATCAGCAATTGGGAATCGAGATAATGTTAATCCTTGTTTTAATGTGTCAAGTACCTTAAACATGCTTCATCTACACACAGATGGAGGCTACATACTTGGCCACAGTACGAGTTCTAGCAGTGCTCCCCCACTAGGAGGAATCCCAATACACGGTGGTATGAGTACTCTTTTGAGGTCAAATCTAATTACTAGTCCTGGTTCACAATCTCCCAAAGCATCCACAGCTGATTTATCCAGAGAAGTTGGGATTGGACTTCAAAATTCTGATTCTTCAACTAAACCAAGAGGTTGTTCTTCTGCTATTTCGAGTAATCAATGCAGCACATTTCACATGCATGTAGAAGGTTCTAATCACAAGATGCTCCCTGTAGATTTAAAGTGTGTTTCAACTAATCAAAAGATAGACTATGATTTGCATCAGGCCCGTAACCTCCCCACTTTTCATGTTGAGCAACGTGTGCCCATTAGTGGTCAAATCCCTGGTCTGGCCCATGATTGTCTTAGCAAAGATGATAGTATTCAATCTATGATGGCAATGAATCCTAAACTCAAACTAGATTGTACTAAACCTCCATCAGGTGATGACCTGTTTGATGTTTTAGGGGTAGATTTGAAAAACAAATTACTGAATGGAAATTGGAATAAACACTTTGCAGACGAATTGGATGCAAATACAGAAAATATTGACAAAAAGTTGGAACCTATGAATATGCCGGGCACAACTACAAATCCTGATATATATTCAGTTAAAGAAGCAATATCAGACAGTGGCATATTTTCTGGGACGGGAACAGACCACCTCTTGGATGCAGTGGTCTCCAAAGCCAAATCTGTTGTAAAACAGGATTCTGATGACATGTCTTGCAGGACAACATTGACAAGGAACAGTACTTCCTCTGTTCCCTCTCCTTCCCGCAGACCGGTTATGTCTGGTAATTTCCAAGGGGGATTATTTGATTTTCCTAAGAATGGTGGTAAAACAGGTGCCACAGAAGCTAGTTTTCTTAGGTCCAGAGGTAACAAGGAAGATGCCGGAAACTGTTCTCAAACTAGTTCTACTTATGGCTCACAACTTAGTTCATGGGTTGAGAACAGTGGGAGTGTTAAACGTGAGAATAGTGTTTCTACTGGATACTCAAAGCGGACAGATGAGGCTTGCAAACCCAATCGTAAGAGGCTTAAACCAGGAGAGAATCCCAGACCTCGCCCCAAAGATCGCCAAATGATTCAAGATCGAGTGAAAGAACTAAGAGAAATTGTGCCAAACGGAGCAAAATGTAGCATAGATGCACTTTTGGAACGGACAATTAAGCACATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTAAAACAAACGGGCGAGTCTAAGATTATTAATAAGGAAGGTGGGTTGCTTTTGAAAGACAACTTCGAGGGAGGAGCTACATGGGCATATGAAGTTGGCTCGCAATCAATGGTTTGTCCTATTGTAGTTGAGGATCTGAACCCTCCTCGTCAAATGCTAGTGGAGATGCTTTGTGAGAAAAGAGGTTTCTTTTTGGAAATAGCGGACTTAATCAGAGGATTGGGTTTAACCATATTGAAAGGGGTAATGGAAGCTCACAATGACAAAATCTGGGCACGCTTTGCTGTTGAGGCTAACAGGGATGTAACAAGGATGGAAATATTCATGTCACTGGTTCGTCTTTTGGAGCAAACGGTGAAGGTAAAAGCATCTTCATCCAATGCAATTGATAACATGGTGTATCACACTTTTCCACAGGCTGCACAGATCCCAGCAACTGGAAGGCCTAGTAGCTTGCAATGA 2871 0.4187 MGFLLKEALRTLCGRNQWSYAVFWKIGCHNSKLLIWEECYYEPLPCPPPTFGMGDLPYQNGGGHWFSSGSQPSQLGIQEEDRVNSLINKMTVNNSVIIAGEGTIGRAAFTGSHQWILLNSFTKDVYPQELYPEVHHQFSAGIQTVAVIPVLPHGVCQFGSFLPINENMGFVNDVKSLILQLGCVPGALLSEDYSANLSIERFAGPSITGVPVSINPPVITSNCTLSVANASNQKSNSFHTSRPFVQTPCHLNAETSACQGSALTLETCKLNQIPSNHYQPNVIPMSETHFSGQQRNGAMEAEVIISDVDSCQQQHSVSHNARSTFDNLTGSGSFGQSGQSEDHLTLMEQQIISAIGNRDNVNPCFNVSSTLNMLHLHTDGGYILGHSTSSSSAPPLGGIPIHGGMSTLLRSNLITSPGSQSPKASTADLSREVGIGLQNSDSSTKPRGCSSAISSNQCSTFHMHVEGSNHKMLPVDLKCVSTNQKIDYDLHQARNLPTFHVEQRVPISGQIPGLAHDCLSKDDSIQSMMAMNPKLKLDCTKPPSGDDLFDVLGVDLKNKLLNGNWNKHFADELDANTENIDKKLEPMNMPGTTTNPDIYSVKEAISDSGIFSGTGTDHLLDAVVSKAKSVVKQDSDDMSCRTTLTRNSTSSVPSPSRRPVMSGNFQGGLFDFPKNGGKTGATEASFLRSRGNKEDAGNCSQTSSTYGSQLSSWVENSGSVKRENSVSTGYSKRTDEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIVVEDLNPPRQMLVEMLCEKRGFFLEIADLIRGLGLTILKGVMEAHNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKVKASSSNAIDNMVYHTFPQAAQIPATGRPSSLQ 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00625 956 CDD bHLH_AtLHW_like 749 818 - -
Vian11g00625 956 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 745 794 IPR011598 GO:0046983
Vian11g00625 956 MobiDBLite consensus disorder prediction 636 661 - -
Vian11g00625 956 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 950 IPR043561 GO:0003700|GO:0006355
Vian11g00625 956 MobiDBLite consensus disorder prediction 694 734 - -
Vian11g00625 956 MobiDBLite consensus disorder prediction 689 759 - -
Vian11g00625 956 MobiDBLite consensus disorder prediction 635 677 - -
Vian11g00625 956 MobiDBLite consensus disorder prediction 735 759 - -
Vian11g00625 956 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 177 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00625 Vian-Chr11 6380344 6385165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00625 518 950 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.403 3.32e-122 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00625 - - gmx:100787748 1468.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00625 11 6380344 6385165 Vian11g00625 11 6380344 6385165 ECH
Vian11g00625 11 6380344 6385165 Vian5g00977 5 31192075 31197439 PCT