Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00615 ATGTGTTCCAACAAGAGAAAAAGGTTAGCTCTATTCAAAACAAATGGAGGTTGTGGATGTAGCAACCCTAAATCCTATGAAGTACTCCAACCCTCCCCAAAACTCAACACCTCAATTCGAGAAAACACAAACCCTACCACTTCCGGCGACAAAGACAACAAACTCTTCTTCGAAGTTCGCACAAACCATGAAAACCCCAACAATGACAACATGCGAAAACCATATTCAAAACTCATTGACAGTGTGGCGGTTGAGAAGGATTCAAAGGACCCGCACAAGGATTTTCGAGAGTCCATGCTCCAAATGATCTTCCAGAGACAAATCTTCACCAAAACCGATCTTCAAGACCTTCTCGAGTGCTTCCTCCGCTTGAACGCCGCCTGTCACCACCAAGTTATCGTTCAAGCTTTCATGGAGATTTGTCACGAAACGTTCCCCAAGAAGAATATCAACGCCGCAGACGCCAATGCTGCTTCTTTCAATAACAAAATTTGA 495 0.4404 MCSNKRKRLALFKTNGGCGCSNPKSYEVLQPSPKLNTSIRENTNPTTSGDKDNKLFFEVRTNHENPNNDNMRKPYSKLIDSVAVEKDSKDPHKDFRESMLQMIFQRQIFTKTDLQDLLECFLRLNAACHHQVIVQAFMEICHETFPKKNINAADANAASFNNKI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00615 164 ProSiteProfiles OVATE domain profile. 84 143 IPR006458 -
Vian11g00615 164 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 52 144 IPR038933 GO:0045892
Vian11g00615 164 Pfam Transcriptional repressor, ovate 88 143 IPR006458 -
Vian11g00615 164 NCBIfam uncharacterized plant-specific domain TIGR01568 82 142 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00615 Vian-Chr11 6263683 6264177 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian11g00615 Ovate 2.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00615 - - vun:114184742 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00615 11 6263683 6264177 Vian11g00615 11 6263683 6264177 ECH
Vian11g00615 11 6263683 6264177 Vian5g00990 5 31363791 31375904 PCT