Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00584 ATGTACCATCATCACCAACACCAAGGAAAAAACATTCATTCTTCTTCCAGAATGCCAATCCCTTCTGAGAGGCACATGTTCCTTCAAACAGGAAATGGTTCTGGAGATTCTGGACTTGTGCTTTCAACTGATGCTAAGCCAAGATTAAAATGGACAGCAGATCTTCATGCCAGATTTATAGAAGCAGTCAATCAGTTAGGTGGAGCTGACACAACAAGTGCAGCAACTGGGGAGAGACTTTCTGAAACCAGTGGAACTCACATGAACAAATTAAGCCTTGGACCGCAGGCTAACAAAGATTTGCATATAAGCGAGGCGCTGCAGATGCAGATTGAGGTGCAGAGAAGGCTCAATGAACAACTTGAGGTACAAAGACACTTGCAGCTTAGGATTGAGGCCCAAGGAAAATACCTTCAGTCTGTGTTGGAGAAAGCTCAGGAGACTCTTGGCAGACAAAATTTGGGAATAGTTGGACTTGAAACTGCCAAAGTTCAACTGTCAGAGCTGGTGTCAAAAGTCTCATCTCAGTGCCTTAACTCAGCATTCTCAGAGCTGAAGGAATTGCAAGGATTTTGCCCTCAGCAAACACACACCAACCAGCCAAACGATTGCTCAGTGGACAGTTGCCTCACATCCTGTGACAGATCACAGAAGGAGCAAGAGATTCAAAATGGCTTTAGACACTTCAACAGCCATATGTTCATGGAACAAAAGGAAGCCACAGAAGCTCCCAACAACCTTAGGAACTGTGAACTCAAGTGGTGTGATGATGGAAAAAAGAACACCTTCCTTGCCCCATTGAGCAGGAATGAAGAAAGAAGAAACTATGCCGCTGAAACCGGTCCTGGCAACTTATCCATGTCCATTGGACTTGAAAGAGAAACAGAAAACAGAAGCAGCATGTATCCTGAAAGGCTAATCACAGAAAACCAATCGGAAGGTGAGTTCCAGCACCGGAACAGAATCAAGACAGAAACAATGAAACCAGTGGATGAAAAAGTTTCTCAAGATTATAGGATGCCAGCTTCTTACTTTGTAGCAGCAAGATTGGACTTAAACAACCATGGAGACAATGAAGCTGCAACCACTTGTAAACAACTGGACTTGAATAGATTCAGTTGGAGCTGA 1128 0.4388 MYHHHQHQGKNIHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTADLHARFIEAVNQLGGADTTSAATGERLSETSGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGIVGLETAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQQTHTNQPNDCSVDSCLTSCDRSQKEQEIQNGFRHFNSHMFMEQKEATEAPNNLRNCELKWCDDGKKNTFLAPLSRNEERRNYAAETGPGNLSMSIGLERETENRSSMYPERLITENQSEGEFQHRNRIKTETMKPVDEKVSQDYRMPASYFVAARLDLNNHGDNEAATTCKQLDLNRFSWS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00584 375 Coils Coil 104 124 - -
Vian11g00584 375 MobiDBLite consensus disorder prediction 70 94 - -
Vian11g00584 375 MobiDBLite consensus disorder prediction 70 93 - -
Vian11g00584 375 Gene3D - 45 133 - -
Vian11g00584 375 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 71 IPR044848 GO:0003700
Vian11g00584 375 Pfam MYB-CC type transfactor, LHEQLE motif 102 148 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00584 Vian-Chr11 5976279 5978062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00584 91 374 G2-like Transcription Factor Family AT3G04030 48.611 4.36e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00584 - - pvu:PHAVU_005G123900g 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00584 11 5976279 5978062 Vian5g01034 5 31963415 31965318 PCT