Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian11g00582 | ATGGCGAGCCACAGAATAGGAGAACTCGGTTTGTCTGAGTCGGGACCTTCAAGTCACCACATCCCTTATGGAGTGCTTCAAGGAATAAACACTAATCCAGTATCAAGCTTAATCAATCAAGGATCTGCTTTTGATTTTGGGGAGCTGGAGGAAGCAATTGTTCTGCATGGAGTCAAGGGTAGAAATGATGATGACAAAGCATCTTTATTCACAGCCAGACCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAACAAACCCCAAGAGGTGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGTCTTTCCAGCAAAACTGAGCCCCCCTTCGAGGCAGAATCTCCCATGAGTAAAAAGGCATCTTCTTCAGATCACCAGGCTTTTGATCAGCAGCATCTGCAGCACAGGCAGCAGCTTCAACAGGATATGGCAAGTGATGCCGCAAGAACAGCCTCTTCACAGAATCAATCAGCAGCCAAATCACAAGAAAAGAGAAAGGGAACTGGTTCAACATCAGAGAAACCACTTGATGCAAAGACATTAAGACGTTTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTTACCCAGATAGAACAAGAACTCCAAAGAGCACGCTCTCAGGGCTTGTTCGTGGATTGTGGTGGTGTTGGAAGCAATGTAAGCTCTGCGGGAGCCGCAATGTTTGACATGGAATATGGAAGATGGTTAGAAGAAGACCACAGGCTAATGGGGGAGCTTCGGAACGGGTTGCAAGTACCCTTATCAGATAGTGATATGAGAGTGATGGTGGATGGATATCTCTCCCACTATGATGAGATTTTCAGGCTCAAGGGTGTGGCTGCTAAATCAGATGTGTTCCACCTTATCAATGGCATGTGGACTTCCCAAGCTGAACGTTGCTTCCTCTGGATTGGTGGTTTTAGACCCTCTGATCTCATCACGATGCTGATACAACAATTGGAGCCACTAGCTGAGCAACAGATAATGGGGATGTATGGCCTGAGACATTCCTCACAGCAAGCAGAAGAAGCACTCTCTCAGGGCCTTGAACAGTTGCAGCAATCTCTGGTGGACACCATTGCTGGAGGCCCGGTTGTTGATGGTGTGCAACAAATGGTCGTTGCCATGAGCAAACTAGCCAATCTTGAAGGATTTGTTCGTCAGGCTGATAATTTGAGGCAACAAACACTTCATCAGTTATGTCGATTACTCACAGTTCGTCAAGCAGCACGATGCTTCATTGTCATTGGAGAATACTATGGACGTCTTCGAGCCCTTAGTTCTCTCTGGGCATCAAGACCACGAGAGACCTTGATCGGTGATGATAACTCATGCCAAACAACAACAGAAATGCAAGTGGTCCAACATTCTCAGAATCATTTCTCGAGTTTCTGA | 1464 | 0.4631 | MASHRIGELGLSESGPSSHHIPYGVLQGINTNPVSSLINQGSAFDFGELEEAIVLHGVKGRNDDDKASLFTARPAATLEMFPSWPMRFQQTPRGGSKSGGESTDSGLSSKTEPPFEAESPMSKKASSSDHQAFDQQHLQHRQQLQQDMASDAARTASSQNQSAAKSQEKRKGTGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQIEQELQRARSQGLFVDCGGVGSNVSSAGAAMFDMEYGRWLEEDHRLMGELRNGLQVPLSDSDMRVMVDGYLSHYDEIFRLKGVAAKSDVFHLINGMWTSQAERCFLWIGGFRPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGGPVVDGVQQMVVAMSKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRETLIGDDNSCQTTTEMQVVQHSQNHFSSF | 487 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian11g00582 | 487 | Gene3D | - | 183 | 232 | - | - | |
Vian11g00582 | 487 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 187 | 202 | IPR004827 | GO:0003700|GO:0006355 | |
Vian11g00582 | 487 | SMART | brlzneu | 180 | 245 | IPR004827 | GO:0003700|GO:0006355 | |
Vian11g00582 | 487 | MobiDBLite | consensus disorder prediction | 81 | 186 | - | - | |
Vian11g00582 | 487 | FunFam | BZIP family transcription factor | 183 | 232 | - | - | |
Vian11g00582 | 487 | ProSiteProfiles | DOG1 domain profile. | 248 | 456 | IPR025422 | GO:0006351|GO:0043565 | |
Vian11g00582 | 487 | MobiDBLite | consensus disorder prediction | 89 | 112 | - | - | |
Vian11g00582 | 487 | MobiDBLite | consensus disorder prediction | 171 | 186 | - | - | |
Vian11g00582 | 487 | MobiDBLite | consensus disorder prediction | 121 | 170 | - | - | |
Vian11g00582 | 487 | Coils | Coil | 203 | 230 | - | - | |
Vian11g00582 | 487 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 114 | 459 | - | - | |
Vian11g00582 | 487 | Pfam | bZIP transcription factor | 183 | 219 | IPR004827 | GO:0003700|GO:0006355 | |
Vian11g00582 | 487 | SUPERFAMILY | Leucine zipper domain | 184 | 227 | IPR046347 | GO:0003700|GO:0006355 | |
Vian11g00582 | 487 | CDD | bZIP_HBP1b-like | 184 | 234 | - | - | |
Vian11g00582 | 487 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 182 | 226 | IPR004827 | GO:0003700|GO:0006355 | |
Vian11g00582 | 487 | Pfam | Seed dormancy control | 266 | 340 | IPR025422 | GO:0006351|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian11g00582 | Vian-Chr11 | 5944106 | 5950500 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian11g00582 | 166 | 487 | bZIP Transcription Factor Family | AT1G08320 | 74.303 | 5.56e-180 | 506 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Vian11g00582 | DOG1 | 5.2e-27 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian11g00582 | K14431 | - | gmx:100775461 | 853.588 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian11g00582 | 11 | 5944106 | 5950500 | Vian11g00582 | 11 | 5944106 | 5950500 | ECH | |
Vian11g00582 | 11 | 5944106 | 5950500 | Vian5g01039 | 5 | 32030044 | 32036755 | PCT |