Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00581 ATGAGTGAAGCAGTGGAGTGTGACCACAAATTCGACACTGTGCTAGTCGTTGTTAGCAGGAAAGTACACTTTGCTTCAATTTTTCCTCTTCCTTCTGCATCACATCATTTTGCTTCTATTCTTGCCCTTAATCTACTTCTATCATTTCGATCATACCCAGATGCATCATTGCATGTTGCATGCAACTGGTACAGTCCCACCCTTTCATCTGCACTCATGAATTTCCAACAATCAGAGCAAGAGGTGCCACTGCAAGACACGGAAGCATCATTCTATCAACTGAACCAGCAGAGTTCAGAAGTCTCACTCCCCGTTGACGAGGAGGGCAGTGACAAGAACGGAAAGAGCGTAGGGTCCATAAGCATGGTGGATGAATTCATAGCCAGCATTTGGAACACAGATGAATTCCAACTTAACCCTCCTCTACCCGTCTATGATGAAGCTGCAAACAACAACAGCGTTGCACCAGAACCCACCATTCCTCAGCCAGCCTCATTCTCTGTCCCTCCCCCAATTTGCAAGAAAACTACGGATGAAGTTTGGTCTCAGATCCAGAATAGCCAACCACAACAAAATGAAGATAATAACAGCCTTGCTAGTGATGAAACACTCCAAAAGGATCCCACATTTGGAGAAATGACTTTGGAGGATTTCCTGATAAAAGCTGGGGTTGTTACTGAATCAACACTGTTCACCACTATATTACCTCAGAATCATTTCGCTAACATTCCAACCAATATTCCATTTAATACAAGCTATATATTAATTGGAACTACTGCACCCAATATGCCCTGTGGTAGATTTGAACCACATCAAATGCTGCCACAGAATAACCACTTTATTGTGAGGAATTTCACTACTACAAATGTTGCTGTGGAGAATAATTGTCAAAACGTAGCAGAATCAAGTGGCAAGGGTAAGAAAAGGATCATTCAAGGTCCTCCCGAAGTGGTAATAGAGAGAAGGCAGCGCAGAATGCTGAAGAATCGAGAATCAGCAGCACGATCTCGTGCAAGAAGACAGGCATATACTGTGGAGCTTGAAGCAGAGCTGAATAATCTGAAAAATGAGAATGAGAACCTTAAGAATATGCTGGCTGAAGATGAACGCAAGAGGCTAGAAGTATTAACTCAGAGAAAGGCCCCAACAACGGTTCAAAAGAGGAATGAGAAAAAGAGGAAATTGAACAGGCCTCTGAGTGCATCCTGGTGA 1212 0.4315 MSEAVECDHKFDTVLVVVSRKVHFASIFPLPSASHHFASILALNLLLSFRSYPDASLHVACNWYSPTLSSALMNFQQSEQEVPLQDTEASFYQLNQQSSEVSLPVDEEGSDKNGKSVGSISMVDEFIASIWNTDEFQLNPPLPVYDEAANNNSVAPEPTIPQPASFSVPPPICKKTTDEVWSQIQNSQPQQNEDNNSLASDETLQKDPTFGEMTLEDFLIKAGVVTESTLFTTILPQNHFANIPTNIPFNTSYILIGTTAPNMPCGRFEPHQMLPQNNHFIVRNFTTTNVAVENNCQNVAESSGKGKKRIIQGPPEVVIERRQRRMLKNRESAARSRARRQAYTVELEAELNNLKNENENLKNMLAEDERKRLEVLTQRKAPTTVQKRNEKKRKLNRPLSASW 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00581 403 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 96 386 IPR043452 GO:0003700|GO:0045893
Vian11g00581 403 SMART brlzneu 317 381 IPR004827 GO:0003700|GO:0006355
Vian11g00581 403 SUPERFAMILY Leucine zipper domain 321 370 IPR046347 GO:0003700|GO:0006355
Vian11g00581 403 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 319 371 IPR004827 GO:0003700|GO:0006355
Vian11g00581 403 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 324 339 IPR004827 GO:0003700|GO:0006355
Vian11g00581 403 MobiDBLite consensus disorder prediction 183 203 - -
Vian11g00581 403 MobiDBLite consensus disorder prediction 153 172 - -
Vian11g00581 403 Gene3D - 319 377 - -
Vian11g00581 403 MobiDBLite consensus disorder prediction 381 403 - -
Vian11g00581 403 Pfam bZIP transcription factor 321 367 IPR004827 GO:0003700|GO:0006355
Vian11g00581 403 Coils Coil 340 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00581 Vian-Chr11 5932819 5936867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00581 94 403 bZIP Transcription Factor Family AT3G44460 39.640 6.35e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian11g00581 bZIP_1 7.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00581 K14432 - gmx:100799576 323.939