Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00558 ATGAGATTGGAAAAATGCTGGTTTTGCTCTTCGACTGTATATCCTGGACATGGAATCCAGTTTGTTCGGAATGATGCAAAGATGAGATTACCTGTTTCTGTTTTGCAGATTTTTCGGTTTTGTCGATCGAAATGCCACAAAAACTTTAAAATGAAGAGAAATCCCCGCAAGGTAAAATGGACCAAGGCATACCGTAGAGTCCATGGAAAGGATATGACACAGGACTCGACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCTGAAAGATATGACAGGAATGTTGCGGAGAATGTCCTTAAGGCTATTCCAAAGATTGATAAGATCAGAGTCACCAGGGAGGAAAGACACCATAAGAATAGGATGAAAGGCAAAAAGGAAAAGCTGCTGAAGGAGGCAGTGAGAGAGTTGGAGCAGGGCATCAGTTTGGTCAAAGCTCCTTCAGTGCTTCAACAGGATCCGTCTCTTACCTTGCCAAAGATCAAGGTTTCTCAACCGCAATCAGAGGAGAATCGTGCCATGGAAGAGTAG 528 0.4356 MRLEKCWFCSSTVYPGHGIQFVRNDAKMRLPVSVLQIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNVAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLLKEAVRELEQGISLVKAPSVLQQDPSLTLPKIKVSQPQSEENRAMEE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00558 175 MobiDBLite consensus disorder prediction 153 175 - -
Vian11g00558 175 PANTHER 60S RIBOSOMAL PROTEIN L24 1 174 IPR000988 -
Vian11g00558 175 FunFam probable ribosome biogenesis protein RLP24 1 76 - -
Vian11g00558 175 Pfam Ribosomal protein L24e 1 74 IPR000988 -
Vian11g00558 175 CDD Ribosomal_L24e_L24 1 63 IPR000988 -
Vian11g00558 175 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 65 - -
Vian11g00558 175 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Vian11g00558 175 SMART 4TRASH 6 53 IPR011017 -
Vian11g00558 175 MobiDBLite consensus disorder prediction 153 167 - -
Vian11g00558 175 Gene3D Ribosomal protein L24e 1 77 IPR038630 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00558 1 175 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 64.571 1.41e-78 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00558 K02896 - gmx:100778077 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00558 11 5601941 5602754 Vian11g00558 11 5601941 5602754 ECH