Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00544 ATGAAGAAGAGGGGTAGGCCTCCAGGGTCGAAGTCAAATCGAGGTCGAGGACGTTCTCCTTCTCCTAGCCCTTCCGGATTTCGAGGAAGTTCTCCTTCTCCTAGCCCTTCCGGATTTCGAGCATGTTCTCCTTCTCCTGGCCCTTCCGGAGTTCCACCAAATACAGTTTCTAACGTTGAACTTTTCTTTGATGATATAGTGAAGAAATTTAACAAAGAAGTCAAATCTTGTGTTCTTGTTACAAGTTTTTCAGATTTGGTTTTTTGGTCTGTGATTTTTCAAAACTTGATTTGCTTGGTGGTGGACATGCAAACAGAGACTGGAACAGACTTAGTCGCTTACCAGATCACTGTGAATATTGGGGAGGACTTGGTAGACAAGGTATCAAGAATTGCTAAAAGATCCTCTCAAACCGTTTGCATACTTTCTGCTGTGGGTTCCATATCGAGCGTTGTCTTTCGCAAGCCCGGTCTTCCAAGTACTGATACTGTGACGTGGGAGCTTACGCTTGGCACTTTCAAGCTAGGGAGTGCGGGAAAAACGACAATACCCGCATGTGCTACTGCTCCAACAACATCTGGACCTCTTCTCATTCCTAAAACAGAGTATCAAGAATTAGAGAGTCTCACTACTCCTAAAACAGCTGATAAAACTTCAGAGTGTGACATTACTCCTAAAACAGCTGATAAAACTTCAGAGAGTGTCACTACTCCTAAAGAAACTGATAAACCAACAGAAAATGTTACTTCTACCTCGAGAGACGGCGAAGATCCAAATGGAGAAGGCGAAAAACAGAGTGTCACTCCTAAAATAACTGATAAACCACAGGAGGAACTCAGTTCTGAAACAGTTGATAAACCACCTGAGAATGTCACTCCTTCAACATCTGATAAACCACCTGAGGATGTCACTCCTGCAACATCCGATAAACCACCTGAGGATGTCACTCCTGCAACATCTGATAAACCACCTGAGGATGTCACTCCTGCAACATCTGATATACCGTCCTGA 1011 0.4382 MKKRGRPPGSKSNRGRGRSPSPSPSGFRGSSPSPSPSGFRACSPSPGPSGVPPNTVSNVELFFDDIVKKFNKEVKSCVLVTSFSDLVFWSVIFQNLICLVVDMQTETGTDLVAYQITVNIGEDLVDKVSRIAKRSSQTVCILSAVGSISSVVFRKPGLPSTDTVTWELTLGTFKLGSAGKTTIPACATAPTTSGPLLIPKTEYQELESLTTPKTADKTSECDITPKTADKTSESVTTPKETDKPTENVTSTSRDGEDPNGEGEKQSVTPKITDKPQEELSSETVDKPPENVTPSTSDKPPEDVTPATSDKPPEDVTPATSDKPPEDVTPATSDIPS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00544 336 Gene3D - 113 182 - -
Vian11g00544 336 MobiDBLite consensus disorder prediction 14 42 - -
Vian11g00544 336 SUPERFAMILY AF0104/ALDC/Ptd012-like 113 177 - -
Vian11g00544 336 MobiDBLite consensus disorder prediction 285 302 - -
Vian11g00544 336 MobiDBLite consensus disorder prediction 219 284 - -
Vian11g00544 336 Pfam Plants and Prokaryotes Conserved (PCC) domain 115 177 IPR005175 -
Vian11g00544 336 MobiDBLite consensus disorder prediction 209 336 - -
Vian11g00544 336 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 2 173 IPR039605 GO:0003680
Vian11g00544 336 MobiDBLite consensus disorder prediction 1 51 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00544 96 184 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 35.955 7.78e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00544 - K24286 vum:124836835 391.349