Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00535 ATGGATTCGCATAGCGAGTCACCTTGGCGAGGTGCTCTCTGCCAAGGCTCGCATATCGAATGGGTGTGCTGTGCGAGTAAATTTATTCGCATAGCGAGTTTAGTCGCTATGCGAGAGATCAATAGTAGTTGGTCTCTATCTAAGGTTTTCGCAAGGCGAGTTAGGTCGCTGTGCGAGAAGCTTATAGTCTCGCTATGCGAAGCGGAGGAAGAGTTTTCCCTGGAGCAAGCTTTGGATGGAGGTGATGCTGCTGAATCCACGGAGGAGAAGCAGAGCGACACCGAAACCACTCTGTCCGACTCCGAGGAAGTTGTCGATGAACCAGATGACCGGAACCGAACTTCCGTTCTGGCAAACGGTCGTGTTGGTTCGCAGAGGATTGTCACCACGTTTTCAGGCGACTCTCTTTCTCTCGGAGTTCGAGAACCGGTTTATGAAGTAGTTGAAGTGAAGTCTAATGGGAAAGTGTCAACTAGAAAAATCAACAGGAGACAATTGTTGAAGTCAAGTGGTCTTCGTCCTCGGGACATTCGAAGTGTGGATCCTTCATTGTTTATGACAAATTCAATGCCTGCTTTGCTGGTCCGGGAGTATGCTATACTTCTAAATCTGGGTTCACTACGAGCAATAGCAATGCAAGATTGTGTACTTATATTTGACAATAATCGCATAGGGGGGAAAGCTTTTCTAGAGACATTGCTGCCTCGATTGAACCCCAAGAACAGCAATGGAGGACCATCGATGCCATTTGAAATTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAACGATTGGAGCAAAGATTGATGGAATTAGAACCTCGTGTACAAGCCCTTCTTGAGGCCTTGCCAAATAGGTTAACTGGTGACATATTGGAGCAGCTTCGTACTAGCAAACAAACTTTGGTTGAGTTAGGTTCCAAGGCAGGAGCTCTCAGACAGATGCTGCTTGACCTTTTGGAGGATCCTCATGAAATACGCCGTATGTGCATCATGGGAAGAAACTGCACACTTAATAAAGGAAACAATAATATGGAATGCTCAGTGCCTTTTGAAAAGCAGAATGCTGAGGAGGAGGAGGAGGAAATTGAAATGCTTTTGGAAAATTATCTTCAAAGATGTGAATCCTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAATTTGAGTTCACGAAGACTTGAGGTTAGCAGAGTAGAACTCCTTCTCCAGGTTGGAACATTCTGTGTGGCAGTAGGTGCCCTTGTAGCAGGTATATTCGGCATGAACCTGAAGTCCTATCTTGAGGAGCATGTGTTGGCATTTTGGCTGACAACAGCGGGGATAATTGTTGGTGGAATTATTGCTTTCTTTCTAATGTATTCCTACCTCAGGGCGAGAAAAATATTTTGA 1425 0.4512 MDSHSESPWRGALCQGSHIEWVCCASKFIRIASLVAMREINSSWSLSKVFARRVRSLCEKLIVSLCEAEEEFSLEQALDGGDAAESTEEKQSDTETTLSDSEEVVDEPDDRNRTSVLANGRVGSQRIVTTFSGDSLSLGVREPVYEVVEVKSNGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDNNRIGGKAFLETLLPRLNPKNSNGGPSMPFEIEVVEAALLSRIQRLEQRLMELEPRVQALLEALPNRLTGDILEQLRTSKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNNNMECSVPFEKQNAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVLAFWLTTAGIIVGGIIAFFLMYSYLRARKIF 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00535 474 CDD Mrs2_Mfm1p-like 147 473 IPR039204 -
Vian11g00535 474 Gene3D Magnesium transport protein CorA, transmembrane region 223 405 - -
Vian11g00535 474 FunFam Magnesium transporter MRS2-11, chloroplastic 223 405 - -
Vian11g00535 474 Gene3D - 140 221 - -
Vian11g00535 474 MobiDBLite consensus disorder prediction 83 97 - -
Vian11g00535 474 FunFam Magnesium transporter MRS2-11, chloroplastic 140 221 - -
Vian11g00535 474 Coils Coil 350 374 - -
Vian11g00535 474 Coils Coil 263 283 - -
Vian11g00535 474 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 100 473 IPR039204 -
Vian11g00535 474 MobiDBLite consensus disorder prediction 77 115 - -
Vian11g00535 474 Pfam CorA-like Mg2+ transporter protein 354 463 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00535 138 474 MRS2 Gene Family AT5G22830 82.789 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00535 K16075 - gmx:100808371 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00535 11 5372996 5389718 Vian11g00535 11 5372996 5389718 ECH