Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00529 ATGAATATTGAACTCTTAGCTAGTTCTACACTTACAGTGGTACTTTACTCAGCTACATCCTATCCTACTCTGTTCCCCAAACTGGATCTTCGGATATGGATGCACTTATTCGCTAGCTCAATTATTCTATCCTACTCTGTTCCCCAAGCTGGAACTTCGGATATGAATACCACCACTGAAGCTACATCCTTCCTACTCTGTCCACCCCACTGTGGATCTTCGTTATCTGAGTTGCCCGGCTCCTGCGCCATTGCCAACGTCCGCTACTCCACCGCTGGCCACTCCAAGCTCGTGAGCGTCCAACCCTTCGTCGCCGGCTACCGTTTCGGCTCCGTCGCCGTCGCGCACAATGGAAACTTCGTGAACTACCGCTCCAAACTGGAAGACAATGGGTCCATCTTCAACATGACCTCCGACACCGAGGTCGTGCTCCACCTGATTGCCACCTCCAAGCACAGACCTTTCCTACTCAGAGTCGTGGATGCCTGCGAGAATCTGAAGGGGGCGTACTCCCTGGTGTTCCTCACGGAGGACAAGCTGGTGGCTGTGAGGGACCCCTTCGGGTTCCGACCTTTGGTGATGGGAAGGAGAAAGAACGGCGCTATGGTTTTCGCCTCGGAGACATGCGCGCTGGATTTGATCGATGCGACGTATGAGAGAGAGGTGAACCCAGGTGAGGTTGTGGTGGTGGACCACACGGGAATCCAATCCCTCTGCCTCGTGACTCATCAGGAGACAAAGCAATGCATCTTCGAGCACATATACTTCGCACTTCCCAACTATGTTGTCTTCAGGAGGTCTATGTACGAGTCTAGGAGGAAATTCGGGGAAATACTGGTCACTGAGAGCCCCGTTGAGTGCGACGTTGTGATTGCGGTTCCCGATTCTGGGGTGGTGGCTGTGCTTGGCTACGCTGCAAAAGCTAGGGTTCCCTTTCAGCAGGGGTTGATAAGGTCGCACTATGTGGGGAGGACTTAA 978 0.5327 MNIELLASSTLTVVLYSATSYPTLFPKLDLRIWMHLFASSIILSYSVPQAGTSDMNTTTEATSFLLCPPHCGSSLSELPGSCAIANVRYSTAGHSKLVSVQPFVAGYRFGSVAVAHNGNFVNYRSKLEDNGSIFNMTSDTEVVLHLIATSKHRPFLLRVVDACENLKGAYSLVFLTEDKLVAVRDPFGFRPLVMGRRKNGAMVFASETCALDLIDATYEREVNPGEVVVVDHTGIQSLCLVTHQETKQCIFEHIYFALPNYVVFRRSMYESRRKFGEILVTESPVECDVVIAVPDSGVVAVLGYAAKARVPFQQGLIRSHYVGRT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00529 325 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 73 325 - -
Vian11g00529 325 Pfam Glutamine amidotransferase domain 100 211 IPR017932 -
Vian11g00529 325 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 61 293 IPR029055 -
Vian11g00529 325 SUPERFAMILY PRTase-like 249 325 IPR029057 -
Vian11g00529 325 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 73 264 IPR029055 -
Vian11g00529 325 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 1 233 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00529 Vian-Chr11 5282315 5288270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00529 73 325 PRT Gene Family AT2G16570 76.953 9.97e-141 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00529 K00764 - var:108330186 485.723